Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00179 ATGAGCGTGATCGACATTCTATTCCGGGTCGACGCCATATGCAAGAGGTACGACAAGTACGATATTGAAAAACAGCGCGACCTCAATGCCTATGGCGATGACGCCTTTGCTCGCCTCTACGCCGTCGTTGAAGCCGACGTTGAATCAACTCTTCGGAAGTCGGCGATGGCTGCAGCTGATCAGAACAGGGCGTCCGCGGCGGCGCTGAACGCAGAGATACGGTCAAAAAAGGCCCGATTGATGGATGAAGTTTTAAAGTTGAAGAAATTGAACCAGAAGAAGGTTAAGGGCCTGTCGAAAGAAGAACAGTCCATTCGTGAGGATTTGGTTCTTGCATTACCAGATAGAATCCAAGCAATCCGAGATGGAACTACCAATGCAGCCAAAATCTCTGGAGGATGGGCTTCTTCAACATCCCATAAAAATATCAAATTTGACTCCTCAGGTAAAGATCATTTTTTTTCGAAGGATTCGGTTTTCTTAATCGATCCCTGTAGTCGATTAATTCGATCTGAAATAGGTGAATGTTTTGAGAGTGAATATTTCGAGCAATCCCAAGAATCAAACCGGTTTAGGCAAGAGTATGAACTACGGAAAATGAAACAGGCATGTTTGGGCGTTATATCCGAAGGATTGGATACTTTGAAAAATCTGGCCCTTGATATGAACGAGGAAATGGATCGACAAGTTCCGCTGATTGATGAGATCGATACAAAGGTCGACAAAGTGACTTCTGATCTGAGAAATACAAATGTTAGGCTCAAGGAAAATCTCTTTAAGATGAGATCCAGCCGAAACTTCTGCATCGACATTATCCTGCTGTGTGTAATTCTGGGAATAGTTTCATACTTATACAAG 858 43.59 MSVIDILFRVDAICKRYDKYDIEKQRDLNAYGDDAFARLYAVVEADVESTLRKSAMAAADQNRASAAALNAEIRSKKARLMDEVLKLKKLNQKKVKGLSKEEQSIREDLVLALPDRIQAIRDGTTNAAKISGGWASSTSHKNIKFDSSGKDHFFSKDSVFLIDPCSRLIRSEIGECFESEYFEQSQESNRFRQEYELRKMKQACLGVISEGLDTLKNLALDMNEEMDRQVPLIDEIDTKVDKVTSDLRNTNVRLKENLFKMRSSRNFCIDIILLCVILGIVSYLYK 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1084082 1085531 + Bpe024476 Bpe01g00179 97427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00179 286 PANTHER SYNTAXIN-73 171 285 - -
Bpe01g00179 286 PANTHER SYNTAXIN-73 1 153 - -
Bpe01g00179 286 CDD SNARE_Qc 205 256 - -
Bpe01g00179 286 Pfam SNARE domain 232 282 IPR000727 -
Bpe01g00179 286 PANTHER SYNTAXIN 171 285 IPR045242 -
Bpe01g00179 286 PANTHER SYNTAXIN 1 153 IPR045242 -
Bpe01g00179 286 Coils Coil 70 90 - -
Bpe01g00179 286 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 195 257 IPR000727 -
Bpe01g00179 286 SUPERFAMILY SNARE fusion complex 203 255 - -
Bpe01g00179 286 Gene3D - 203 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00179 Bpe-Chr1:1084082 Bpe04g01584 Bpe-Chr4:22116149 1.43E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00179 K08506 - vvi:100258712 347.821