Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00179 | ATGAGCGTGATCGACATTCTATTCCGGGTCGACGCCATATGCAAGAGGTACGACAAGTACGATATTGAAAAACAGCGCGACCTCAATGCCTATGGCGATGACGCCTTTGCTCGCCTCTACGCCGTCGTTGAAGCCGACGTTGAATCAACTCTTCGGAAGTCGGCGATGGCTGCAGCTGATCAGAACAGGGCGTCCGCGGCGGCGCTGAACGCAGAGATACGGTCAAAAAAGGCCCGATTGATGGATGAAGTTTTAAAGTTGAAGAAATTGAACCAGAAGAAGGTTAAGGGCCTGTCGAAAGAAGAACAGTCCATTCGTGAGGATTTGGTTCTTGCATTACCAGATAGAATCCAAGCAATCCGAGATGGAACTACCAATGCAGCCAAAATCTCTGGAGGATGGGCTTCTTCAACATCCCATAAAAATATCAAATTTGACTCCTCAGGTAAAGATCATTTTTTTTCGAAGGATTCGGTTTTCTTAATCGATCCCTGTAGTCGATTAATTCGATCTGAAATAGGTGAATGTTTTGAGAGTGAATATTTCGAGCAATCCCAAGAATCAAACCGGTTTAGGCAAGAGTATGAACTACGGAAAATGAAACAGGCATGTTTGGGCGTTATATCCGAAGGATTGGATACTTTGAAAAATCTGGCCCTTGATATGAACGAGGAAATGGATCGACAAGTTCCGCTGATTGATGAGATCGATACAAAGGTCGACAAAGTGACTTCTGATCTGAGAAATACAAATGTTAGGCTCAAGGAAAATCTCTTTAAGATGAGATCCAGCCGAAACTTCTGCATCGACATTATCCTGCTGTGTGTAATTCTGGGAATAGTTTCATACTTATACAAG | 858 | 43.59 | MSVIDILFRVDAICKRYDKYDIEKQRDLNAYGDDAFARLYAVVEADVESTLRKSAMAAADQNRASAAALNAEIRSKKARLMDEVLKLKKLNQKKVKGLSKEEQSIREDLVLALPDRIQAIRDGTTNAAKISGGWASSTSHKNIKFDSSGKDHFFSKDSVFLIDPCSRLIRSEIGECFESEYFEQSQESNRFRQEYELRKMKQACLGVISEGLDTLKNLALDMNEEMDRQVPLIDEIDTKVDKVTSDLRNTNVRLKENLFKMRSSRNFCIDIILLCVILGIVSYLYK | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1084082 | 1085531 | + | Bpe024476 | Bpe01g00179 | 97427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00179 | 286 | PANTHER | SYNTAXIN-73 | 171 | 285 | - | - | |
Bpe01g00179 | 286 | PANTHER | SYNTAXIN-73 | 1 | 153 | - | - | |
Bpe01g00179 | 286 | CDD | SNARE_Qc | 205 | 256 | - | - | |
Bpe01g00179 | 286 | Pfam | SNARE domain | 232 | 282 | IPR000727 | - | |
Bpe01g00179 | 286 | PANTHER | SYNTAXIN | 171 | 285 | IPR045242 | - | |
Bpe01g00179 | 286 | PANTHER | SYNTAXIN | 1 | 153 | IPR045242 | - | |
Bpe01g00179 | 286 | Coils | Coil | 70 | 90 | - | - | |
Bpe01g00179 | 286 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 195 | 257 | IPR000727 | - | |
Bpe01g00179 | 286 | SUPERFAMILY | SNARE fusion complex | 203 | 255 | - | - | |
Bpe01g00179 | 286 | Gene3D | - | 203 | 256 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00179 | Bpe-Chr1:1084082 | Bpe04g01584 | Bpe-Chr4:22116149 | 1.43E-39 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00179 | K08506 | - | vvi:100258712 | 347.821 |