Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00189 ATGGCGAAAGAAGTGGAAGTTGCGGAGCAGGGCGATTACGCGAGAAAAGACTACCAGGACCCTCCTCCCGCGCCACTGATAGATATGGAGGAGATTACTCTTTGGTCATTTTACAGAGCTCTGATCGCGGAGTTCATTGCGACGCTTCTGTTCCTCTACGTCACGATTTTGACTGTGATCGGATATAACAGCTCCACTGCGCCACCTAATAACCCCTGCGATGGAGTTGGTGTTCTCGGTATTGCCTGGGCCTTCGGAGGAATGATTTTTGTCCTTGTCTACTGCACTGCCGGAATCTCTGGAGGGCACATAAACCCGGCTGTTACGCTTGGGCTGTTTCTGGCGAGGAAGGTGTCGCTCGTGAGGGCCTTAATGTATATGGTCGCGCAGTGTTTGGGCGCAATCTGCGGGTGTGGATTGGCGAAGGCCTTCCAAAAGTCATACTACGACAGGTATGGAGGTGGCGCCAACGAGCTACAGCCCGGCTACAGCGTAGGCACTGGATTGGGCGCAGAGATCATCGGCACTTTCGTTCTCGTCTATACCGTCTTCTCAGCCACTGATCCTAAGCGAAGTGCTCGAGACTCCCATGTTCCTGTTTTGGCTCCTCTGCCAATTGGGTTTGCTGTTTTCATGGTTCACTTGGCCACCATTCCAGTGACTGGAACTGGTATCAACCCAGCGAGAAGTTTAGGAGCTGCTGTTATCTACAACGAGAAGAAAGCCTGGGATGAACAATGGATTTTCTGGGTTGGTCCTTTTGTTGGAGCTGCCATTGCTGCTTTCTACCACCAGTATATTCTCAGAGCGGGCGCCATTAAGGCTCTTGGATCTTTCAGGAGCAATGCTTGA 852 51.88 MAKEVEVAEQGDYARKDYQDPPPAPLIDMEEITLWSFYRALIAEFIATLLFLYVTILTVIGYNSSTAPPNNPCDGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKVSLVRALMYMVAQCLGAICGCGLAKAFQKSYYDRYGGGANELQPGYSVGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNEKKAWDEQWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1132508 1133620 - Bpe000181.1 Bpe01g00189 97437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00189 283 CDD MIP 39 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 TIGRFAM MIP: MIP family channel proteins 43 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PANTHER AQUAPORIN PIP2-4-RELATED 1 283 - -
Bpe01g00189 283 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bpe01g00189 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Bpe01g00189 283 SUPERFAMILY Aquaporin-like 30 269 IPR023271 -
Bpe01g00189 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Bpe01g00189 283 Pfam Major intrinsic protein 32 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00189 283 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00189 Bpe08g00157 CCT
Bpe01g00189 Bpe08g00157 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00189 Bpe-Chr1:1132508 Bpe15g00808 Bpe-Chr15:18257018 2.67E-146 dispersed
Bpe01g00189 Bpe-Chr1:1132508 Bpe02g00794 Bpe-Chr2:5774315 3.50E-167 wgd
Bpe01g00189 Bpe-Chr1:1132508 Bpe04g01673 Bpe-Chr4:22754171 4.62E-168 wgd
Bpe01g00189 Bpe-Chr1:1132508 Bpe04g00701 Bpe-Chr4:4503306 4.85E-158 wgd
Bpe01g00189 Bpe-Chr1:1132508 Bpe08g00157 Bpe-Chr8:844091 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00189 K09872 - pvy:116105008 499.59