Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00198 ATGGCTGGAACTGGAAGAGCTACTCCGACTACAATTACGTACTCTCCTTCTCCCACAACCCAAAAGACTAGGCATTCCTTTTACAATAAGGACGACGTCGATTGGGTCCGACCCGATGGCCGCGGCTTCCACCAGTGCCGACCTGTGTTTTTCAGGACTGGTGCTGTAAATGCTGCATCAGGATCTGCTTATGCAGAGTTTGGAAATACCAAAGTCATCGTATCTGTATTTGGTCCAAGAGAAAGTAAGAAAGCGATGATGTACAGCGACATAGGTCGGCTTAATTGCAGTGTCAGCTATGCAACATTTGCTACCCCTGTTCGAGGGCAGGGATTAGAGCACAAAGAATTCTCCTCAATGCTTCATAAGTCTCTGGAGGGTGTAATAATACTGGAAACTTTCCCTAAGACAACTGTTGATGTATTTGCATTGGTTTTGGAGTCTGGAGGCAGTGATCTACCAGTGATTATATCATGTGCCAGTCTTGCCCTAGCCGATGCGGGAATTATGGTTTATGACCTTGTTCCCTCAGTATCCGTGTCTTGTTTTGGTAAGAATCTCGTCATTGATCCAGTCTCGGAAGAAGAAAACTACCAAGATGGAAGTCTAATGATAACTCTCATGCCATCTCGATATGAGGTCACTCAACTCACAGTGACAGGGGAATGGTCGGCACCTAAAATTGATGAGGCAATGCAGCTCTGCCTGGATGCTTGCTCAAAGCTTGCAAAGATCATGAGAGTGTGTTTGAAAAAAGCTTCAAAACCTACAAGGTTTAGTTTCTTAATCTCAATCACAATTGTGTTTAATCTGACCATTTCCATATTTGAATTTGGAATGTCTTTTAATTTTCTGCCAAGAAAAATATTGTTTTGTCTTGCTATTTATCCATTTCGACCTCTTTTTCAGGTCCTGATTTGGATCGTAATTCCTAATCTAGCCGGTTCGACTATGACGAACACAAAGAACTTCCTCCGATTCATCTTGATCGTTCAATATTTTCCGAGACTTTTTCTAATATTTCCTCTCTCATCTCAAATCGTCAAGGCGACCGGAGTTGTAACACAGACAGCATGGGCGGGGGCTGCTTATAATCTCATTCTTTACATGTTAGCAAGCCATGTTTTAGGAGCTTGCTGGTATCTTTTATCAATCGAGCGAGAAGAATCATGCTGGAGAAAAGTTTGCGATCGTGAAAATCTGTCCTGTGATTTTGTCTTCTTCGACTGTCACAGAATCAACGAACCTCGAAGAGGGTCATGGTTTAACTCGAGCAATATTAAAACATTATGCAATCCCGATAATAGTTTCTACAAGTTCGGAATATACGGCGATGCCGTGACTTTTGACGTCATGACTTCCCCGTTCTTCAGGAAATACTTCTTCTGTCTTTGGTGGGGTTTGAGGAATCTGAGTTCTTTGGGACAAAATCTCTCCACCAGCACTTATGTTGGGGAAATAATTTTTGCCATAATCATAGCAACTCTTGGACTGGTTCTGTTTGCTCTGCTTATTGGTAATATGCAAACGTATCTTCAGTCTACAACAGTCCGATTTGAAGAGTGGAGGATAAAGAGAAGAGATACTGAGCAATGGATGCATCACAGACAGCTTCCGCCGGAGCTGAGACAGTCGGTGAGAAAATATGATCAGTATAAATGGGTTGCGACTCGAGGAGTAGATGAAGAAGCTCTGCTCAAAGGCCTTCCGATGGATCTCCGACGAGACATTAAACGCCATCTCTGCCTCGACCTTGTTCGCAGAGTTCCTTTGTTCGATGAAATGGACGAGAGAACGCTGGATGCAATCTGCGAGAGGCTGAAGCCGGCGTTGAGCACAGAAGGGACGTTTGTGGTTCGAGAAGGCGACCCAGTTAATGCAATGCTGTTTATAATCAGAGGAAACCTTGATTCCTACACCACAAATGGCGGACGAACTGGGTTTTTCAATTCATGCAGAATAGGGCCAGGGGATTTCTGTGGCGAAGAGTTGCTCACGTGGGCGCTGGACCCTCGGCCAGGCGTTGCCCTCCCTAGCTCCACTCGCACAGTGGAAGCTATCTCAGAATTCAGATTCTACTCGCATCAATGGCGGACGTGGGCGGCTTGTTTTGTGCAGGCCGCTTGGAGGCGTTACAAGAAACGCAAGGAAGCGGCGGAGCTGAGGGCTAGAGAGAGTCAACCGGAGGTTTACTCACCTGAATTGCAGATTGCTGCTCCAGCCATTAGAAACGGCGGTAAGAACAGAGCTGGGTCTGCGACTGTGAAGTCGTTGCAGAAGCCGGAAGAACCAGATTTCTCCGTGGTCGATGAATGA 2316 45.55 MAGTGRATPTTITYSPSPTTQKTRHSFYNKDDVDWVRPDGRGFHQCRPVFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYATFATPVRGQGLEHKEFSSMLHKSLEGVIILETFPKTTVDVFALVLESGGSDLPVIISCASLALADAGIMVYDLVPSVSVSCFGKNLVIDPVSEEENYQDGSLMITLMPSRYEVTQLTVTGEWSAPKIDEAMQLCLDACSKLAKIMRVCLKKASKPTRFSFLISITIVFNLTISIFEFGMSFNFLPRKILFCLAIYPFRPLFQVLIWIVIPNLAGSTMTNTKNFLRFILIVQYFPRLFLIFPLSSQIVKATGVVTQTAWAGAAYNLILYMLASHVLGACWYLLSIEREESCWRKVCDRENLSCDFVFFDCHRINEPRRGSWFNSSNIKTLCNPDNSFYKFGIYGDAVTFDVMTSPFFRKYFFCLWWGLRNLSSLGQNLSTSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTVRFEEWRIKRRDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRRVPLFDEMDERTLDAICERLKPALSTEGTFVVREGDPVNAMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVALPSSTRTVEAISEFRFYSHQWRTWAACFVQAAWRRYKKRKEAAELRARESQPEVYSPELQIAAPAIRNGGKNRAGSATVKSLQKPEEPDFSVVDE 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1194717 1201497 - Bpe000190.1 Bpe01g00198 97446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00198 771 ProSiteProfiles cAMP/cGMP binding motif profile. 591 692 IPR000595 -
Bpe01g00198 771 CDD RNase_PH_MTR3 46 252 - -
Bpe01g00198 771 Gene3D - 32 258 IPR027408 -
Bpe01g00198 771 CDD CAP_ED 591 689 IPR000595 -
Bpe01g00198 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED 689 767 - -
Bpe01g00198 771 SMART cnmp_10 591 719 IPR000595 -
Bpe01g00198 771 Gene3D Helix hairpin bin 519 582 - -
Bpe01g00198 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED 291 689 - -
Bpe01g00198 771 ProSiteProfiles IQ motif profile. 698 727 IPR000048 GO:0005515
Bpe01g00198 771 MobiDBLite consensus disorder prediction 1 24 - -
Bpe01g00198 771 Pfam Ion transport protein 264 518 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe01g00198 771 SUPERFAMILY cAMP-binding domain-like 521 665 IPR018490 -
Bpe01g00198 771 SUPERFAMILY Ribonuclease PH domain 2-like 172 253 IPR036345 -
Bpe01g00198 771 SUPERFAMILY Voltage-gated potassium channels 258 513 - -
Bpe01g00198 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 291 689 - -
Bpe01g00198 771 MobiDBLite consensus disorder prediction 742 771 - -
Bpe01g00198 771 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 200 IPR020568 -
Bpe01g00198 771 Gene3D Jelly Rolls 589 704 IPR014710 -
Bpe01g00198 771 Pfam 3' exoribonuclease family, domain 2 174 234 IPR015847 -
Bpe01g00198 771 Pfam 3' exoribonuclease family, domain 1 45 169 IPR001247 -
Bpe01g00198 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 689 767 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00198 Bpe-Chr1:1194717 Bpe01g00671 Bpe-Chr1:4729042 0 dispersed
Bpe11g01243 Bpe-Chr11:9260569 Bpe01g00198 Bpe-Chr1:1194717 2.01E-27 dispersed
Bpe01g00198 Bpe-Chr1:1194717 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00198 K05391 - csv:101210775 783.482