Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00199 ATGGTGGCAGATAAACTTTCTGATACTTCTGGCATAAATAAGTGGAAATGTAAATGTTCTGCTCCATACCAAGGAAATCAGAGTTTCATCCTTGAAGCTAATTGTTCTCCATCCTGTGCTTGCAACCCAGATGCTGATGGAAGTGGCAGTATATGGACATGTATGTGTGCAGCTGATGGCTTTCCTAAAGTAGCAGATAAAAATGATAAACTTAATTGTTTTACAAGCTGCAACTGCACGTCAGGAGGATTTCTAAATGTAACACCAACCTCCAAAACGTATATTGCCAGCAAAGTGGTTGTGATTATTCTATTGCTTTGTGTAATAATCACGACCTTCGCATTTTTAGCCTCAGTGGTGTGCTATCTTTCTCTAAGGAAAAAGTTATCTATTCACTCTCCAGCATTTTCAGCATATGGACAAGCGAGTTACAACAGCTTCAGCAACTTACTTAGTCATAAGAGTTTATCACTATTAGAAATGCGAACTAGTGCAGGTTCTCCCACTCGTCATAACACAGGATGCTTTCACATAGCCTCTTGGCCGTCGAAGACTAAACATGGGACTATATATGGAACCATTATTCAATTCTCATATTCTGAGTTGGAAAATGCAACCAATAATTTTTCAGACTCCAACCTTGTAGGACGTGGAGGAAGTAGCCTTGTTTATCGAGGTATACTCAAAGATGGTAGTATTGTGGCAGTGAAGCGGCTAAAAACTCAAGGAGGGCCTGATGCTGACTCTTTATTTCTCACGGAGATAGAATTACTTTCCAGACTTCATCATTGTCATTTGGTGTCTCTACTTGGCTACTGCTTGGAATCCCAGGGGAAACATACTGAAAAGCTATTGGTATATCAATACATACCAAGGGGTAATCTAAGAGATTGCTTGGATAGTGCCAACAAGGAAAGGATGAATTGGGCTTCTCGTGTCATGATTGCAATGGGAGCTGCTAGGGGCTTGGAGTATCTCCACGTGGCTGCTGCTCCTAGAATTCTGCATAGAGATGTGAAATCAACAAACATTCTTCTCGATGAAGATTGGCAAGCAAAAATATCTGATCTGGGAATGGCTAAAAGATTAAGCATTGATGGTTTCACCAGCGGTTCCAATTCTCCAGACAGAATGCAGGGGACTTTTGGCTATTTTGCACCTGAGTATGCTATAATTGGAAGAGCCTCTCTCAAGTCTGATGTTTTCAGTTTTGGGGTGGTGCTTCTAGAGCTGATCACGGGTCAGCATCCCATTCAGAAATCAGCTAAAAAAGGAGATGAAAGCCTTGTCATCTGGGCTACTCCTCGTTTACAGGATAGCAGTCGAGTAATAAATGAGCTTCCTGACCCACGATTAAAGGGACTATTCCCTAAGGAAGAGATGCAAATAATGGCTTACTTAGCAAAGGAGTGTCTTCTATTGGATCCCGAGGATAGACCAACTATGAGTGAAGTTGTTCAAATTCTTTCAACCATTGCCCCAGAGAAATCTAAAAGGAGAAATATCACCGCCAATATTTTCCAGGGGACTTCAGCATATAGTAGCCAAAGTGAATCATTTATAGAAAGAGCCGATTCAAATCCTCTTTCAGAGAAGCAATTATATTCGAAGACGAGGCTTGACGGTGAAGCCGACCTAAGACAAACACCATCCTGCAGATCCAAGGCCAGGTTTACATTATCATTGGATGATGATAGTTCCTTTTATATTGGAGATGAGAGTAAAGAAGATATTATTTCGGCTGAGGATATGCAAAGATTATTACTCTTGACTTCGAATGCTAGGAGTTGTCATGCCTCCGACGATGTAATAGTTGATCTATCTGAGCCTCAGTTTGAATCATTCAAATGCTACGCCTCTCCGATGAACTGA 1872 41.19 MVADKLSDTSGINKWKCKCSAPYQGNQSFILEANCSPSCACNPDADGSGSIWTCMCAADGFPKVADKNDKLNCFTSCNCTSGGFLNVTPTSKTYIASKVVVIILLLCVIITTFAFLASVVCYLSLRKKLSIHSPAFSAYGQASYNSFSNLLSHKSLSLLEMRTSAGSPTRHNTGCFHIASWPSKTKHGTIYGTIIQFSYSELENATNNFSDSNLVGRGGSSLVYRGILKDGSIVAVKRLKTQGGPDADSLFLTEIELLSRLHHCHLVSLLGYCLESQGKHTEKLLVYQYIPRGNLRDCLDSANKERMNWASRVMIAMGAARGLEYLHVAAAPRILHRDVKSTNILLDEDWQAKISDLGMAKRLSIDGFTSGSNSPDRMQGTFGYFAPEYAIIGRASLKSDVFSFGVVLLELITGQHPIQKSAKKGDESLVIWATPRLQDSSRVINELPDPRLKGLFPKEEMQIMAYLAKECLLLDPEDRPTMSEVVQILSTIAPEKSKRRNITANIFQGTSAYSSQSESFIERADSNPLSEKQLYSKTRLDGEADLRQTPSCRSKARFTLSLDDDSSFYIGDESKEDIISAEDMQRLLLLTSNARSCHASDDVIVDLSEPQFESFKCYASPMN 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1203378 1211521 - Bpe000191.1 Bpe01g00199 97447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00199 623 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK ISOFORM X1 2 616 - -
Bpe01g00199 623 Pfam Protein kinase domain 210 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00199 623 SUPERFAMILY Protein kinase-like (PK-like) 187 489 IPR011009 -
Bpe01g00199 623 Gene3D Transferase(Phosphotransferase) domain 1 290 514 - -
Bpe01g00199 623 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Bpe01g00199 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Bpe01g00199 623 CDD STKc_IRAK 215 489 - -
Bpe01g00199 623 ProSiteProfiles Protein kinase domain profile. 209 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00199 623 Gene3D Phosphorylase Kinase; domain 1 180 289 - -
Bpe01g00199 623 SMART serkin_6 209 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00199 623 PANTHER OS01G0750732 PROTEIN 2 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00199 Bpe-Chr1:1203378 Bpe03g00490 Bpe-Chr3:24626403 4.08E-78 dispersed
Bpe01g00199 Bpe-Chr1:1203378 Bpe10g00839 Bpe-Chr10:14356868 7.99E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63104 PF00069 Pkinase 3.60E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00199 - - vvi:100263865 740.339