Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00239 ATAAGAATGGGGGATAGTCGTAAATGGAGTCGTACTGATAAGCGGAGCTCTAAGAAGCAGAAAGTAATTCGGACGGCCGAAGAAGAGCTTGAGTCCAAACTAGGGTTTGATGTATTCTCCGAAGGCGAAAAAAGACTTGGATGGCTACTAACTTTCGCTTCCTCATCTTGGGAGGATCAGGACACCAAGAATGTCTATAGCTGTGTTGATTTATATTTTGTCACACAGGATGGCACCAGTTTTAAATCAAAATATAAATTCCGCCCATATTTCTATGTAGCTACAAAGCATAAAATGGAGATGGATGTCGAAGCATATCTGAGGCGACGTTATGAAAGTCAAATTGCTGATATTGAAATTATAGAAAAAGAGGACCTTGATCTTAAAAACCATTTGTCTGGCTTGCGCAAGTCCTATCTAAAGCTATGTTTTGATACTATTCAAGATTTGATGAATGTGAAAAGTGAACTTATGCACGTCATTGAAAGAAATAGGGCAAAATCTGACGCCGCAGAAGCATATGATTCAATTTTATCTGGAAAAAGAGAACAAAGACTTCAAGATTCTCTAGAATGTATTGTGGATCTTCGAGAGTATGATGTTCCTTACCATGTTCGTTTTGCTATTGATAATGATATACGATGTGGACAGTGGTATGATGTCAGCATATCCAGCTCTGGGGTTAAGCTTGAGAGAAGGACAGATCTTCTACAACGTGCTGAAGTACACATATGTGCCTTTGATATTGAGACCACAAAACTTCCTTTGAAATTCCCAGATGCTGAATATGACAGCGTAATGATGATTTCATATATGGTTGATGGTCAAGGGTATCTGATCATCAACAGAGAGTGTGTTGGGGATGACATAGAGGATTTGGAATACACTCCAAAACCAGAATTTGAAGGGTTCTTTAAAGTGACGAATGTAAAAACCGAGGTAGAGCTTCTTAGACAGTGGTTCACCCATATGCATGAGGTGAAGCCTGGCATCTACGTCACATATAATGGTGATTATTTTGATTGGCCATTCCTAGAAACCAGAGCCGCTTTTCATGGATTTAGAATGAGTGATGAATTAGGATTTCAATGTGACAAGAATCAGGGTGAATGCCGTGCAAAATTTGCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGGGATAGTTATCTTCCTCAAGGTAGCCAGGGCCTGAAGGCTGTTACTAAGGCAAAATTGGGATATGATCCCCTTGAGGTTAATCCTGAAGATATGATGATGGCCTCTTATTCCGTATCTGATGCCGTTGCCACATACTACTTGTATATGACATACGTCCATCCTTTCATTTTTTCTCTAGCTACCATTATTCCAATGTCACCTGATGAGGTTTTGCGTAAGGGTAGTGGGACTCTATGTGAAATGCTTCTTATGGTCCAGGCTTACAAAGCAAATGTTATATGTCCTAACAAGCATCAGAATGATCCAGAAAAGTTCTATGACAATCGGCTTCTTGAGAGTGAAACATATATCGGAGGCCATGTGGAATGCCTTGAGAGTGGTGTTTTTAGATCTGACCTCCCTACTAGTTTTAGACTCGATCCAGAAGCTTATGATCTGCTGATAAAAAACTTGGATAGAGATCTGCATTATGCCATACGAGTAGAAGGTAAGATGGACTTAGAACTAGTGTCAAATTACGAAGAAGTGAAGACAGCTATTATGGAAAAGCTTGTGAGGTTGCGCGACGAACCTATACATGAAGAATGCCCTCTTATATATCATCTTGATGTAGCTGCCATGTATCCAAATATTATTCTTACAAACAGGCTTCAGCCACCATCAATAGTTATAGATGAGGTTTGTACTGCTTGTGATTTCAACCGGCCTGGAAAAACTTGTCTGAGAAAACTTGAATGGGTTTGGCGTGGTGAGGTCTTCATGGCTAAAAAAAGCGATTATTATCACTTGAAGAAACAAATTGAGTCAGAGTTTGTTGATAATGGTGACAATAAATTTTCAAAATCTTTTCTTGACCTGCCTAAAATGGAGCAGCAAGTAAAGCTTAAAGAGCGTTTAAAGAAATATTGTCAAAAGGCTTATAAAAGAGTGCTTGACAAGCCAGTCACTGAACTTCGAGAAGCAGGGATCTGTATGAGAGAAAATTCCTTTTACGTTGACACTGTTCGCAGCTTTCGAGATAGGAGGTATGAATACAAAGGACTAAATAAGACTTGGAAGGGGAAGTTGTCTGAAGCCAAAGCTAGTGGAAAATCTATTAAGATCCAGGAAGCGCAAGATATGGTAGTTCTATATGATTCGTTACAGCTAGCTCACAAATGTATACTTAACTCGTTCTATGGATATGTTATGCGGAAGGGAGCAAGATGGTACTCTATGGAAATGGCTGGGGTTGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCGTTTACTGATTGAAAAAATTGGAAAACCACTTGAACTTGACACAGATGGTATTTGGTGTGCACTTCCTGGATCTTTTCCTGAGAACTTTACTTTCAAAACAAAAGATCCGACGAAGAAGCTCATGATCTCATATCCATGTGTGATGCTTAATGTTGACGTGGCATTGAACAATACAAATGATCAATATCAGGTTCTCACAGACCCTGTCAGTAAAATATACTCAACTCATAGTGAATGCTCCATCGAGTTTGAGGTGGATGGACCATACAAGGCAATGATTCTTCCTGCTTCAAAGGAAGAGGGTATTTTGATTAAGAAGAGATATGCTGTGTTTAATGATGATGGGACACTTGCTGAGCTGAAAGGTTTTGAGATCAAACGAAGAGGCGAGCTCAAGCTCATCAAAGTTTTTCAGGCCGAGCTTTTTGACAAGTTTCTCCATGGGTCAACTCTGGAGGAATGTTATTCAGCTGTTGCAGCAGTTGCAAATCGATGGCTTGATCTTCTAGATAATCAAGGAAAAGACGTCGCTGATAGCGAGTTGCTTGATTACATATCAGAATCAAGTACAATGAGCAAGTCTTTGGCAGAATATGGTGAACAAAAATCATGCGCTGTGACGACTGCACGACGTCTTGCTGATTTTCTCGGGGATACAATGGTCAAAGATAAAGGCCTACGTTGTGCATACATCGTTGCATGTGAACCAAAGGGAACACCTGTAAGTGAACGTGCTGTTCCTGTAGCTATTTTTGAGACTGATGCAGATATCGTGAAGTTTTACGTACGAAAATGGTGCAAGATTTCATCAGAAGTTGGCATTAGATCCATTATTGATTGGTCTTATTACAAGCAACGGCTCTCTTCAGCAATTCAAAAAATCGTAACAATTCCTGCTGCCATGCAAAAGGTACAGTTTGTTGTGGTCTATCTGAGTTGTCTGGTTTTTCATCTGATAATCAGTAAAATTTTCCAGGTTGCTAACCCCGTCCCTAGAGTAGTTCATCCTGATTGGCTGTATAAAAAGGTTCGTGAGAAGGATGACAAATTTCGGCAACAGAAGCTTGTTGATATTTTCAACAACTCGAGGAGGGATACCTTTTCCAAAAAGGATGGAGTTTCAACCTTCACCAATCATGTTATTAATGAAGAGAAGGCTGACGATATAGAAGATTTCCAAAAGAAAATAGACTCTGTAGATAGACCAAGACCCATAGTTCATTGCCATAAAAATAATGCCGTGAGAAATCCAGTCAATGGAAGTGTACAAATGGATTCCCTGGAACAGAAAAGACATAAAATGCATGAATCAATTTCACCAAGACATTTAAAAAATGTCGACAGAAAGTTAGATTACCAGGGGTGGCTTGAAACTGAGAAAGTCAGGTGGAAGAATACTTTGGACAGGAGGAAGAAGCAGAGATTGGCAAATTCAAGGATTCCATTTCATGGTGATGGGGTTGGTCGGGAACTGGGGAATTCTATGAGTCATAAAGAAGGTCAAGGAAGAAAAGGAGTTAGTTCATATTTTAAGAGGCATGATACAGCCTTAACAAATTGCTATTGGCAGATTTTACAGCTCGTTCCTGGTTCAAAGAGTGGACAGTTTTTTGCATGGGTTGTTGTTGAAGGAGTCATGCTTAAAGTTTCCATTACTGTTCCTAGAATGTTTTACCTCAACTCCAAGGCTCCTACAGCAGAAACATTTGTAGCAAGGCGTGTTAACAAGATCCTTCCTCATGGAAGGCATAACTATAATCTCTATGAGGTTGTTATCGATGAAAGCCATTTTAAGACGCAAAGCCACAAGCTTGCAGCTCTTCTTGCGGATCCCCAAGTTGAGGGGATTTATGAAACCAAACTACCATTGGACTATAATTCCATCCTCAGCCTTGGTTGTGTCTGTAAACCTGATAAAACTGCTAAGAAACAGACTTTTCAGGACGAGTGGAATCTGAATGAACTGCACATGAAGACTACAGCAGAATGCAATTATTTGGAAAAATCCATCTCTTTCTTCTACTTGTATAATAGCATCACGGAGGGACGGGCTCTGTATATTATATACTTTCCTGCCTCAAGATCCATTTATGTAGTGGTGGTTAATCCATATCAAAACAAGGATTTGTCACCAGCTTTTCTGGAAAAACAATTTCGTGAAGCTTGCCAAGTGTTCTCTATTCCACCTCCAGTCAATGGAATCATCTTCAAGGTTGACTATGTTGGACGTGTCAAAGATGCTGAAATATCGATGCAGCGAGCAATAACTGAGCACAGACATGAACATCATGGACCTACAATAGCTGTTATTGAGAGTCCAATTGCTCATCTGCTTAAGTCTGGCATACGAGCTCTAGATGACTTTCCTTGTGTGAACATTCCATCCAATGCTCGTGATAGCCAATATCAGGTTCTTGGTTGGCAACAAGTAGCTGCGAAAATTGGAATGCAACGTTGTTCTGCTTCATGCCAATGGTTGAATGAACGGATTTCTCTCGCCAGATATGCTCATGTACCATTGGGAAATTTTGAGCTTGATTGGCTGATATTTACGGCAGATATCTTCTTTTCCAGAGCATTACGAGATAAGCAACAGGTTTTTATTTTTGTTTTTTATTCTCAGGTGCTTTGGATATCAAATGATGGCGTTCCAGATCTAGGGGGTATTAGTGAAGAAAATACGTGTTTTATTGACGAGGTTCAGCAGCCTGTTCTGATATATCCTGGAGCATACAGAAAAGTTGTCGTGGAGCTTAAAATTCATCACCTAGCTGTTGATGCTCTTCTAAAGAGCAACCAAATAAATGAGTTGGAAGGAGGTGTTCTATTTGGATTTGAGCAGGACGTGAATTCAGGATCACAGAGTTTGCATGAACAAGGTGGATTTGATGAGGCTGCCTCATGTGCACCAGTATTCCGAGTTCTTAAACAGTTTGTACAGAGATGCCTTGCTGATGCAGTAACGTCTGGAAATGTGTATGCTGATGCAATACTCCAGCACCTATATAGATGGATTTGCAGCCCCCAGTCAAGACTTCATGACCCAGCTATTCATCGTACACTTCATAAGGTACTCATGCAAAAAGTTTTTGCTTTATTCTTGGCTGAGTTACGCAAATTGGGTGCTACTATCATTTTTGCCAACTTCTCAAGGGTAATCATAGACACAGGAAAGTTAGATCTCTCAGCTGCCAAAGCTTACTGTGACAGCGTGCTTAAAACATTGCAAACTAGAGATCTATTTGAATGGATTGAGCTGGAACCAGTCCAATTTTGGCATTCTTTGTTGTTTATGGATCAGTACAATTATGGAGGAATCCCTGCAAAAGATAATGAAATTGTTCAGGATGAATCACAAGTGGATATTGTGTCTAGCTGGAATATTGCTGAATACTTACCAAAGAAAATTCAGGATCATTTTGTTTTTATTATCTCTCAATTTTTATACATTCCCTGGAAATATTCTACAAAACAAGCTTCTATTAGAACTTCTTTGCAGCATAGTGACTCATGCACGCCATCTATCACAGTTATGGCCGCCGAATCCTTTGAGTCACATATGACGGAATATCTAAAGGGGCAGATTAGCTCCTACTTCACAGAAAAACTTCTTGAAATAGTTCGTGATATTGTTCGTCATATGAAGGGTATCAATAAAACTGATAGTGATCAACATAGTTGGCCTGGGATTCCACGACTTTCTGGTAGCTGCCACAAAGGGGATGCTGCTCTGGAGTTCATTAAGCATACCTGTGCTGTTTTGGCGCTAGATCAAACTGTTCAGCATGATGTTCTGGTGCTAAGAAAGAATTTGCTGAAATACGTTCATGTAAGGGAGTTTGCTCCAGAAGCTGAGTTTTTTGATCCCTGCTTGTCCTTCATCCTTCCAAATGTCATTTGCAGCTATTGCAACGACTGTCGGGATCTGGACCTGTGTCGCGACTCGGCTTTGCAGACACAGGATTGGTGCTGTGCCGTGCCACAATGCGGCCAACCCTACAACCGGGAGGTGATGGAGAATGCTCTTCTTCAAATTGTAAGGCAGAGACAGCGTGCTTTTCACCTACAGGACCTTGTATGTGTCAGGTGTAAGCTGGTCAAAGCTCCTCATTTAGCTGAGCAATGCGCTTGCGCTGGCTCATTTAAATGCAGGGAAGATGTGACAGAGTTTCAAAGCAAGATGAAGATTTTCTTCGGCATTGCTGTTCGTCAGAAATTTCAACTTCTCCAAGAGTGTACTTCATGGATTTTAGAAGATCGCTGA 6696 40.38 IRMGDSRKWSRTDKRSSKKQKVIRTAEEELESKLGFDVFSEGEKRLGWLLTFASSSWEDQDTKNVYSCVDLYFVTQDGTSFKSKYKFRPYFYVATKHKMEMDVEAYLRRRYESQIADIEIIEKEDLDLKNHLSGLRKSYLKLCFDTIQDLMNVKSELMHVIERNRAKSDAAEAYDSILSGKREQRLQDSLECIVDLREYDVPYHVRFAIDNDIRCGQWYDVSISSSGVKLERRTDLLQRAEVHICAFDIETTKLPLKFPDAEYDSVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGFFKVTNVKTEVELLRQWFTHMHEVKPGIYVTYNGDYFDWPFLETRAAFHGFRMSDELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQNDPEKFYDNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPEAYDLLIKNLDRDLHYAIRVEGKMDLELVSNYEEVKTAIMEKLVRLRDEPIHEECPLIYHLDVAAMYPNIILTNRLQPPSIVIDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDNGDNKFSKSFLDLPKMEQQVKLKERLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLSEAKASGKSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDPTKKLMISYPCVMLNVDVALNNTNDQYQVLTDPVSKIYSTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDVADSELLDYISESSTMSKSLAEYGEQKSCAVTTARRLADFLGDTMVKDKGLRCAYIVACEPKGTPVSERAVPVAIFETDADIVKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVQFVVVYLSCLVFHLIISKIFQVANPVPRVVHPDWLYKKVREKDDKFRQQKLVDIFNNSRRDTFSKKDGVSTFTNHVINEEKADDIEDFQKKIDSVDRPRPIVHCHKNNAVRNPVNGSVQMDSLEQKRHKMHESISPRHLKNVDRKLDYQGWLETEKVRWKNTLDRRKKQRLANSRIPFHGDGVGRELGNSMSHKEGQGRKGVSSYFKRHDTALTNCYWQILQLVPGSKSGQFFAWVVVEGVMLKVSITVPRMFYLNSKAPTAETFVARRVNKILPHGRHNYNLYEVVIDESHFKTQSHKLAALLADPQVEGIYETKLPLDYNSILSLGCVCKPDKTAKKQTFQDEWNLNELHMKTTAECNYLEKSISFFYLYNSITEGRALYIIYFPASRSIYVVVVNPYQNKDLSPAFLEKQFREACQVFSIPPPVNGIIFKVDYVGRVKDAEISMQRAITEHRHEHHGPTIAVIESPIAHLLKSGIRALDDFPCVNIPSNARDSQYQVLGWQQVAAKIGMQRCSASCQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALRDKQQVFIFVFYSQVLWISNDGVPDLGGISEENTCFIDEVQQPVLIYPGAYRKVVVELKIHHLAVDALLKSNQINELEGGVLFGFEQDVNSGSQSLHEQGGFDEAASCAPVFRVLKQFVQRCLADAVTSGNVYADAILQHLYRWICSPQSRLHDPAIHRTLHKVLMQKVFALFLAELRKLGATIIFANFSRVIIDTGKLDLSAAKAYCDSVLKTLQTRDLFEWIELEPVQFWHSLLFMDQYNYGGIPAKDNEIVQDESQVDIVSSWNIAEYLPKKIQDHFVFIISQFLYIPWKYSTKQASIRTSLQHSDSCTPSITVMAAESFESHMTEYLKGQISSYFTEKLLEIVRDIVRHMKGINKTDSDQHSWPGIPRLSGSCHKGDAALEFIKHTCAVLALDQTVQHDVLVLRKNLLKYVHVREFAPEAEFFDPCLSFILPNVICSYCNDCRDLDLCRDSALQTQDWCCAVPQCGQPYNREVMENALLQIVRQRQRAFHLQDLVCVRCKLVKAPHLAEQCACAGSFKCREDVTEFQSKMKIFFGIAVRQKFQLLQECTSWILEDR 2231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1450323 1474030 + Bpe000232.1 Bpe01g00239 97487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00239 2231 Pfam DNA polymerase family B 747 1057 IPR006134 GO:0000166|GO:0003677
Bpe01g00239 2231 MobiDBLite consensus disorder prediction 1 20 - -
Bpe01g00239 2231 CDD DNA_polB_epsilon_exo 241 436 - -
Bpe01g00239 2231 SUPERFAMILY Ribonuclease H-like 67 482 IPR012337 -
Bpe01g00239 2231 Coils Coil 557 577 - -
Bpe01g00239 2231 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
Bpe01g00239 2231 SUPERFAMILY DNA/RNA polymerases 461 1107 IPR043502 -
Bpe01g00239 2231 Gene3D - 239 460 IPR036397 GO:0003676
Bpe01g00239 2231 CDD POLBc_epsilon 495 1114 - -
Bpe01g00239 2231 Gene3D Palm domain of DNA polymerase 562 929 IPR023211 -
Bpe01g00239 2231 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1133 2228 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bpe01g00239 2231 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 33 1116 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bpe01g00239 2231 Pfam Domain of unknown function (DUF1744) 1543 1917 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bpe01g00239 2231 SMART DUF1744_2 1524 1917 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bpe01g00239 2231 Gene3D - 933 1118 IPR042087 -
Bpe01g00239 2231 Gene3D DNA Polymerase, chain B, domain 1 57 233 - -
Bpe01g00239 2231 SMART polmehr3 240 834 IPR006172 GO:0000166|GO:0003676|GO:0003887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00239 K02324 - qsu:111996722 3633.19