Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00305 ATGGAATCGTCGCCGGCGATTTCACCGGACCTAGACTTGGACAATCTCAGAGTCCTCGAGGTTCTTGGCAAAGGAGCTATGGGCACGGTGTTCCTCGTTCACGACTCGGAAGCTGACCCCTCTGCCGCGTCTCCCTTCGCTCTCAAGGTTGTTGAGAAGGAAGCCTCCATCCACTCGAAGGGGAAGCTTGACGTTGAACGCAGGGCCCGATGGGAAATCCAGGTTCTCAGCCGATTTTCCGACCCGAATCCTCATCCTTTTCTTTCCTTCATTCTTGGCTCATTCGACTCCGAAGAGCTCATTGGCTGGGCCATACCCTACTGCTCTGGTGGGGATCTTAACGTGCTCCGTTACCGACAAACGGACCACGTTTTTTCACCGTCTGTAATCCGGTTTTACTTGGCTGAGATCATCTGCGCTCTCGACCATCTACATAATATGGGTATCGTCTATCGCGATTTAAAGCCGGAGAACGTTTTGATACAGCAATCTGGCCACGTTACTCTCACAGACTTCGACCTTTCGCGTAATTTAGCCCCGATGTCCGTTAAAACCATAATTCAAGCCGATATTTTGCCGGAGATTCGGCAGAAAAACCGCCGTAAACTGATCCGTTGGCTGAGTGCCGGTCCAGACAGGAAAAAAGGTTTGAAAAAGACAAAGTCTGCTCGGGTCAGCCCAGTGAGCCGAAGAAAACCGAGTTTTTGCAAAGGCGAGCGTTCCAACTCGTTCGTCGGCACAGAAGAGTACGTTTCTCCGGAGGTTGTTCGCGGTGACGGACACGAATTCTCCGTCGACTGGTGGGCGCTCGGAGTTTTGACGTACGAGATGCTTTACGGCAAGACACCGTTCAAGGGGAAGAATCGGAAAGAAACGTTTCGAAACATTCTGTTCAAAGCTCCAGAATTCATCGGGAAGCTCACAGACTTAACGGATTTGATCGAGCGGCTGTTAGAGAAGGACCCCACCAAGCGTCTGGGCTACCTAAATGGCGCAAAAGAGATCAGAGACCACGTTTTCTTCAAAGGCGTGAAGTGGGACCTTTTAACAGACGTTTCCCGCCCGCCGTTTATTCCGTCAAGGGACGAGAAAGATTTCCGGGCCGGATGTGTCACCGTAAAAGAGTATTATCAGAACTTAAAGATGCCGTCCTCGATTCCACCGTCACCATCGGCATCACTCTCGATTGACTGTCAAAGAAGCGTCTCTTTGACGGAGTTCTGA 1224 51.06 MESSPAISPDLDLDNLRVLEVLGKGAMGTVFLVHDSEADPSAASPFALKVVEKEASIHSKGKLDVERRARWEIQVLSRFSDPNPHPFLSFILGSFDSEELIGWAIPYCSGGDLNVLRYRQTDHVFSPSVIRFYLAEIICALDHLHNMGIVYRDLKPENVLIQQSGHVTLTDFDLSRNLAPMSVKTIIQADILPEIRQKNRRKLIRWLSAGPDRKKGLKKTKSARVSPVSRRKPSFCKGERSNSFVGTEEYVSPEVVRGDGHEFSVDWWALGVLTYEMLYGKTPFKGKNRKETFRNILFKAPEFIGKLTDLTDLIERLLEKDPTKRLGYLNGAKEIRDHVFFKGVKWDLLTDVSRPPFIPSRDEKDFRAGCVTVKEYYQNLKMPSSIPPSPSASLSIDCQRSVSLTEF 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1878661 1879884 - Bpe000295.1 Bpe01g00305 97553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00305 407 Gene3D Transferase(Phosphotransferase) domain 1 239 360 - -
Bpe01g00305 407 Gene3D Transferase(Phosphotransferase) domain 1 108 179 - -
Bpe01g00305 407 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00305 407 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Bpe01g00305 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Bpe01g00305 407 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00305 407 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 384 - -
Bpe01g00305 407 Pfam Protein kinase domain 239 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00305 407 Pfam Protein kinase domain 18 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00305 407 PANTHER FLIPPASE KINASE 1-RELATED 11 384 - -
Bpe01g00305 407 SUPERFAMILY Protein kinase-like (PK-like) 13 395 IPR011009 -
Bpe01g00305 407 Gene3D Phosphorylase Kinase; domain 1 14 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00305 Bpe-Chr1:1878661 Bpe06g00547 Bpe-Chr6:16513874 1.29E-96 dispersed
Bpe01g00305 Bpe-Chr1:1878661 Bpe08g01280 Bpe-Chr8:14191260 1.39E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63109 PF00069 Pkinase 3.30E-28 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00305 - K08286 jre:108998699 565.074