Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00308 | ATGTTTAGATTCTGGGGAAGGAGGATCCTTGAAGCCAATGAGGATGATCTTAAGGTGCCTTTAAATGGATCAATTCTCAACAACGAACAAGATATAGCAGTATGTCGACTAAGAATTAAAGGAATGACATGTACTACCTGTGCTGAATCCGTTGAAAGTGCCCTTCTAATGTTTGAGGGAGTGAAAAAAGCAGCAGTTGGTTTAGCTTTGCAAGAAGCAAGGGTGCATTTTGATTCTAACCTCATCAATGCTGAGCAAGTTGCTCAGGCAATCGAAGATGCTGGCTTTGGAGCTGAGATAATAAATTCCGGAAATGATGTTAACATAGCTCATCTAAAACTTCAAGGAATTAGTTCTCCAGTACAGATGACCACTATAAAATCTTTGCTTGAAGTAGCTGTTGGTGTAGATCGTGTTGACATGGACCTGAAAGGACAAACGGTTGCCATAAGCTATGACCCAGACTTCACTGGTCCTAGGTCACTTATACAATGCATAAGGGAATCAGGCCAAGGTCCAGACACTTTTGATGCAAACTTGTTTGCTCCTCCAAGACGAAGAGATACAGAGCAACTTCATGAAATTCAGACTTACAGAAACCAATTCCTGCTCAGCTGCCTGTTTTCTGCTCCTGTATTTTTATTTGCCATGGTACTTCCCATGCTCCCCCCTTATGGAAATTGGTTAGGGTACAAGATTCATAACATGTTTACTGTTGGGATGCTTCTTAGATGGATTCTTTGCACACCTGTTCAGTTTATTGTTGGCCGAAGATTTTATGTGGGATCATACTATGCATTGAGGCGAAAATCTGCTAATATGGAAGTTCTAGTGGCATTAGGCACTAATGCTGCCTACTTTTATTCTGTATACATAATAATGAAATCATTGGCATCAGATGGGTTTGAAGGACAAGATTTCTTTGAAACTAGTTCCATGCTAATATCCTTTATTCTCTTGGGGAAATACTTGGAGGTAGTGGCTAGAGGAAAAACTTCCGATGCTTTAGCTAAGCTTGCGGATCTTGCTCCTGATGTAGCTCATTTGTTAAAATTAGACGATGATGGGAACGTTATCTTAGAGATGGAAATTGACACCCAATTGATACAGAGAAATGACATTATAAAGATTGTTCCAGGTGAAAAAGTTCCGGTTGACGGAATTGTTATAAATGGTCATAGTCATGTTAATGAGAGTATGATCACAGGAGAGGCTAGGCCCACTTTTAAAAAAGCTGGTGACAAGGTTATTGGCGGCACTGTCAATGAAAATGGATGTTTATTGGTTAAAGCCACTCATGTGGGGTCTGATACTGCACTATCTCAAATTGTTCAACTTGTGGAGGCTGCGCAACTTGCTAGAGCACCTGTTCAGAAATTAGCTGACCAGATATCAAAATTTTTTGTTCCTGCTGTTGTTCTCGCAGCATTTCTAACATGGCTTGCGTGGTTCGTTTCTGGAGAAATGCGTATATATCCTAGGCACTGGATACCAAAGGCTATGGATAGATTTGAGCTTGCATTGCAGTTTGGCATTTCTGTGCTAGTGGTTGCCTGCCCATGCGCTCTTGGTCTAGCAACACCAACAGCAGTCATGGTTGCCTCAGGGAAAGGTGCTTCTCAAGGGGTGCTTATCAAAGGTGGAAACGCCTTGGAAAAAGCACACAAGGTACATTTTATAGAATGTGAACGAAACTTATAG | 1701 | 41.21 | MFRFWGRRILEANEDDLKVPLNGSILNNEQDIAVCRLRIKGMTCTTCAESVESALLMFEGVKKAAVGLALQEARVHFDSNLINAEQVAQAIEDAGFGAEIINSGNDVNIAHLKLQGISSPVQMTTIKSLLEVAVGVDRVDMDLKGQTVAISYDPDFTGPRSLIQCIRESGQGPDTFDANLFAPPRRRDTEQLHEIQTYRNQFLLSCLFSAPVFLFAMVLPMLPPYGNWLGYKIHNMFTVGMLLRWILCTPVQFIVGRRFYVGSYYALRRKSANMEVLVALGTNAAYFYSVYIIMKSLASDGFEGQDFFETSSMLISFILLGKYLEVVARGKTSDALAKLADLAPDVAHLLKLDDDGNVILEMEIDTQLIQRNDIIKIVPGEKVPVDGIVINGHSHVNESMITGEARPTFKKAGDKVIGGTVNENGCLLVKATHVGSDTALSQIVQLVEAAQLARAPVQKLADQISKFFVPAVVLAAFLTWLAWFVSGEMRIYPRHWIPKAMDRFELALQFGISVLVVACPCALGLATPTAVMVASGKGASQGVLIKGGNALEKAHKVHFIECERNL | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1897906 | 1901191 | + | Bpe000298.1 | Bpe01g00308 | 97556 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00308 | 566 | ProSitePatterns | Heavy-metal-associated domain. | 39 | 68 | IPR017969 | GO:0046872 | |
Bpe01g00308 | 566 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 314 | 560 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bpe01g00308 | 566 | PANTHER | COPPER-TRANSPORTING ATPASE HMA5-RELATED | 28 | 560 | - | - | |
Bpe01g00308 | 566 | CDD | HMA | 37 | 99 | IPR006121 | GO:0046872 | |
Bpe01g00308 | 566 | ProSiteProfiles | Heavy-metal-associated domain profile. | 109 | 175 | IPR006121 | GO:0046872 | |
Bpe01g00308 | 566 | SUPERFAMILY | HMA, heavy metal-associated domain | 104 | 173 | IPR036163 | GO:0046872 | |
Bpe01g00308 | 566 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 306 | 552 | IPR023298 | - | |
Bpe01g00308 | 566 | Gene3D | - | 28 | 108 | - | - | |
Bpe01g00308 | 566 | Gene3D | - | 329 | 451 | - | - | |
Bpe01g00308 | 566 | Gene3D | - | 109 | 181 | - | - | |
Bpe01g00308 | 566 | Pfam | E1-E2 ATPase | 361 | 540 | - | - | |
Bpe01g00308 | 566 | ProSiteProfiles | Heavy-metal-associated domain profile. | 34 | 100 | IPR006121 | GO:0046872 | |
Bpe01g00308 | 566 | Pfam | Heavy-metal-associated domain | 37 | 96 | IPR006121 | GO:0046872 | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 89 | 109 | - | - | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 202 | 223 | - | - | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 60 | 83 | - | - | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 257 | 282 | - | - | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 237 | 257 | - | - | |
Bpe01g00308 | 566 | PRINTS | Copper-transporting ATPase 1 signature | 34 | 59 | - | - | |
Bpe01g00308 | 566 | PANTHER | ATP7, ISOFORM B | 28 | 560 | - | - | |
Bpe01g00308 | 566 | SUPERFAMILY | HMA, heavy metal-associated domain | 30 | 104 | IPR036163 | GO:0046872 | |
Bpe01g00308 | 566 | SUPERFAMILY | Calcium ATPase, transduction domain A | 362 | 447 | IPR008250 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00308 | Bpe-Chr1:1897906 | Bpe08g01488 | Bpe-Chr8:15588049 | 3.26E-14 | dispersed | |
Bpe01g00308 | Bpe-Chr1:1897906 | Bpe08g00778 | Bpe-Chr8:9667587 | 1.76E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00308 | K17686 | - | csin:114270619 | 842.802 |