Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00329 ATGACTTCTCCAGTCCTCGACATCGTTGGCGAAGAATTAGTTGAGATTCTTCACTCTGTATCTATTCAAGATCAGGGAAAAGTACAAACTAAGGTAGAGATGCAACAAGTACGTAGCGGGGATCATGGAGGAGTTTGTGCAATATGCTTGAATAAGATAAATCTTCAAGAAACTGCTCTTGTCAAAGGTTGCGAGCATGCCTACTGTGTGAACTGCATCCTTCAGTGGGCTTCTTACAGTCAGAAACAAGCTTGCAAGTGCCCTCAATGTAAACATCCGTTCGAGTTCCTCAATGTCCATAGAACGCTTGATGGAAGCATCCAAGATTTCATGTTTGAGGAGAGTGTGTGCCTACTTCTGAGAGCTTCATGGTTCAAGCCGTTGATTGTGGAAGATCAACAGGAAGAAGCTTATGACGAATACGAAGATTATTTTCCATACGAAGACGAGGAGGATGAAATCGAAGAAATTTACTTTGGTCGATCAGCTGCAAGTCTCCGAATTGGCAATAGAAGATGGGGAGACAATGGTTATGTGAGGGCAGGCCGGCAAGAGGCAAGACCCGTGTGTAGAACAAGTGTTCAAGAATTGGGTGGGAGCTCATCCCACGAGCCTAAGAAGAAAGAGGCCATAAACGATAAAACGGGAAGAAGGGCGAAAAGGGCCCTCAAACGAGAAGCTGCTGACAAGGCGGCCGCAGCAAAGCATTTGGAGCATTTGGCAAGGTTAGGCAGGAAGTGA 741 45.75 MTSPVLDIVGEELVEILHSVSIQDQGKVQTKVEMQQVRSGDHGGVCAICLNKINLQETALVKGCEHAYCVNCILQWASYSQKQACKCPQCKHPFEFLNVHRTLDGSIQDFMFEESVCLLLRASWFKPLIVEDQQEEAYDEYEDYFPYEDEEDEIEEIYFGRSAASLRIGNRRWGDNGYVRAGRQEARPVCRTSVQELGGSSSHEPKKKEAINDKTGRRAKRALKREAADKAAAAKHLEHLARLGRK 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2053092 2056074 + Bpe000317.1 Bpe01g00329 97577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00329 246 MobiDBLite consensus disorder prediction 194 228 - -
Bpe01g00329 246 Pfam Ring finger domain 46 91 IPR001841 -
Bpe01g00329 246 MobiDBLite consensus disorder prediction 201 228 - -
Bpe01g00329 246 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Bpe01g00329 246 ProSiteProfiles Zinc finger RING-type profile. 46 91 IPR001841 -
Bpe01g00329 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 246 - -
Bpe01g00329 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 246 - -
Bpe01g00329 246 SUPERFAMILY RING/U-box 45 97 - -
Bpe01g00329 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 115 IPR013083 -
Bpe01g00329 246 SMART ring_2 46 90 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00329 Bpe08g00291 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00329 Bpe-Chr1:2053092 Bpe08g00291 Bpe-Chr8:1761176 1.12E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00329 - - cit:102609827 281.952