Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00337 ATGGAGGCTCTGGTTCTTCCGAAACTGCCGCCGTCTCACTTCTTTTATCCTGCCGGTTTCTGTAGCTGCTTTTCATCTGCATTTCGCTCTTCCTCTTCCCCCAATCTTCCATTCTCCTTCCGTCGGTTTTCTTCGTCGCTTTCTGTCTCGGCTTGCACTTCCGCTGCTAGTGAGGCCAGTAATCCGTCACTTGGATCTTTATCCCTCGGTCACCTCACCCGCCCCGATTTTCCTATACTACACCAGGAAGTAAATGGCTCGAAACTTGTCTATTTGGACAATGCCGCTACTTCTCAAAAGCCAACTGCTGTTTTAAAGGCTTTGCAAAATTATTATGAAGCTTACAATTCTAATGTGCATCGTGGAATTCATTATCTGAGTGCCAAGGCTACTGATGAGTATGAATTGGCACGAAAAAAGGTCGCGTCTTTTGTCAATGCATCAGATCCTAGAGAAATTATTTTCACCAGGAATGCTACTGAAGCTATAAATTTGGTAGCTTACTCATGGGGCCTTACAAATTTGAAGCCAAATGATGAGATCATCCTTACAATTGCAGAACATCATAGTTGCATTGTTCCTTGGCAAATTGTAGCTCAAAAGACTGGTGCAATTTTAAAATTTGTGAGTCTGACTGAAGATGAGGTTCCAGATATAGGAAAGTTGAAAGAAAGTATTACAACTAGAGCAAAGCTTGTAGTTGTCCATCACGTTTCAAATGTATTAGCATCTGTACTTCCTATTGAAGATGTAACGATGTGGGCTCATGATTGTGGCGCAAAAGTTTTGGTAGATGCTTGTCAGAGTGTTCCGCATATGGTGGTTGATGTGCAGAACTTAAAAGCTGACTTTCTAGTTGCTTCTTCTCACAAGATGTGTGGCCCCACAGGCATTGGATTCTTGTATGGAAAGGGTGAGCTCTTGTCGGAGATGCCACCATTCTTAGGTGGAGGGGAAATGATTTCTGATGTTTTTCTAGATCATTCCACATTTGCAGAACCTCCGTCAAGATTTGAAGCTGGGACACCCGCAATTGGAGAAGCAATTGGTTTGGGGGCGGCAATTGATTATCTAGTAGACATTGGCTTGCAAAATATACACAACTATGAGGTGAGGAAGAGCAATTTACTATTCGTTCTAAAAAGTAGTAATTATATTGAGAGATATGGTTTGTATATAGTGTTAATAAAAAGTAGTGCTTCTTTCTGCTTGTCACAGGAAGGTTTGTCAAGATATTTGTATGAAAGCCTTCTCTCAGTTCCTAACATTCGCATTTATGGCCCAATACCTAAAGAAGGTGTCCACCGTGCTGCCCTTTGTTCGTTTAACGTTGAAAATATCCACCCAACGGATATTGCGACTTTTCTTGATCAGCAGCATGGTGTGGCCATCAGATCAGGACACCACTGTGCGCAACCCCTGCATCGTAGCTTAGGAGTGAACGCAAGCGCCCGAGCAAGTCTTCACTTCTACAACACAAAAGAAGACGTGGACTTGTTTATTCAGGCTCTAAATGACACGGTCAGCTTCTTCAACTCTTTCAAGGGAAGGATTGTGGGAGAGAGATACGACGCGGTGGCGACCATTATTGGGGAAGAGGAAGAAGAGACGCGCCATAGCCGTCTGCAGATTTTCTTTTCGTCTCTTTTTTCAAGTCTTGGAAGAGTTATCAGCTTTATCTCTGAGCAAGAAGAAGAAAAGAAAATGGCTTCCCGAGCTGTGGTTCCTCGGCAACAGCCACAACCAAGAGGTCAAGTTAAGCAGAAAATGGCGACAGAAGAAGCAAGAACAAGGCGAGTTCTTAGAGATATTGGAAATCTAAATAACCCATTTTACTTCGATAATTTTCAGAAAGAAACCTCCGAAATAGTTGCAGGAGTTCGAGCCGGGAAAGCAGGGATGACCAAAGCTACAACAGCTCGAAAGAACGAATCTGAAAAGCCTATAATTGAAGAGGAAAAATACAAAAAGGACAGAGAATCAATCGATGAAAGCAAAACTAGAAGGAAGAACGTGAAAACTCTCAGTTCAATCCTCAGTGCTTGGAGCAAGGCTGCCTGTGAAGACAACAAGAAGGGTGGGAAGCCATTAGTAAACATTGATGAAGCTGATGCTGATAATGAATTAGCTGTACTTGAATACATCGATGATATGCACAAGTTTTATAAGCTGACAGAAGATGAGAATAGAGTGCATGATTATATGGATTCACAGCGAGACATAAATGCTAAAATGAGATCGATTCTAATAGACTGGTTGATTGAAGTTCATCATAAATTCGAACTCACGCCGGAGACTCTTTACTTAACGGTATATATTGTCGATCAATTTCTTTCGGTCAAGGCAGTACAAAGGAAAGAACTTCAGTTAGTCGGCATAAGTTCCATGCTTTTAGCATGCAAGTACGAAGAAATTTGGGCTCCTGAGGTAAATGACTTTGTGAGTATATCAGCTAATGCTTATGTAAGAGAACAAATTCTTGTGATGGAGAAAACAATTCTTGGAAAGCTCGAATGGCAATTAACAGTTGCAACTCCTTATGTTTTCCTGGTTCGTTACATCAAAGCTTCTGAATCATCTGATGAGCAGATGGAAAGTATGGTTTATTTCCTGGCTGAGCTTGGTTTAATGCACTATCTCACCATCGTTTCTCATTGCCCTTCTATGCTTGCTGCTTCTGCTGTTTATGCTGCAAGATGCATACTTGATAAACTGCCTTATTGGACTGCAACTCTAGAACACCACACTGGCTATTTCGAAGACCAGGTCAGGGAATGTGCAAAAATCTTGGTTGGCTTGCATCTCGGAGCAGCTGCTAGTAAGCTTAAGGCGGTGTATCGGAAATACACGAGTTCTGAGCATTTTGCTGTCGCTCGTCTTCATCCTGCAGAAATGCTAAATGAAAATTCGTTGGATTTCTACTCAGTAAGTTTTGATTAG 2940 41.94 MEALVLPKLPPSHFFYPAGFCSCFSSAFRSSSSPNLPFSFRRFSSSLSVSACTSAASEASNPSLGSLSLGHLTRPDFPILHQEVNGSKLVYLDNAATSQKPTAVLKALQNYYEAYNSNVHRGIHYLSAKATDEYELARKKVASFVNASDPREIIFTRNATEAINLVAYSWGLTNLKPNDEIILTIAEHHSCIVPWQIVAQKTGAILKFVSLTEDEVPDIGKLKESITTRAKLVVVHHVSNVLASVLPIEDVTMWAHDCGAKVLVDACQSVPHMVVDVQNLKADFLVASSHKMCGPTGIGFLYGKGELLSEMPPFLGGGEMISDVFLDHSTFAEPPSRFEAGTPAIGEAIGLGAAIDYLVDIGLQNIHNYEVRKSNLLFVLKSSNYIERYGLYIVLIKSSASFCLSQEGLSRYLYESLLSVPNIRIYGPIPKEGVHRAALCSFNVENIHPTDIATFLDQQHGVAIRSGHHCAQPLHRSLGVNASARASLHFYNTKEDVDLFIQALNDTVSFFNSFKGRIVGERYDAVATIIGEEEEETRHSRLQIFFSSLFSSLGRVISFISEQEEEKKMASRAVVPRQQPQPRGQVKQKMATEEARTRRVLRDIGNLNNPFYFDNFQKETSEIVAGVRAGKAGMTKATTARKNESEKPIIEEEKYKKDRESIDESKTRRKNVKTLSSILSAWSKAACEDNKKGGKPLVNIDEADADNELAVLEYIDDMHKFYKLTEDENRVHDYMDSQRDINAKMRSILIDWLIEVHHKFELTPETLYLTVYIVDQFLSVKAVQRKELQLVGISSMLLACKYEEIWAPEVNDFVSISANAYVREQILVMEKTILGKLEWQLTVATPYVFLVRYIKASESSDEQMESMVYFLAELGLMHYLTIVSHCPSMLAASAVYAARCILDKLPYWTATLEHHTGYFEDQVRECAKILVGLHLGAAASKLKAVYRKYTSSEHFAVARLHPAEMLNENSLDFYSVSFD 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2116089 2124320 - Bpe000326.1 Bpe01g00337 97585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00337 979 PANTHER CYCLIN-B1-4 590 965 - -
Bpe01g00337 979 SUPERFAMILY Cyclin-like 845 966 IPR036915 -
Bpe01g00337 979 CDD SufS_like 90 504 IPR010970 GO:0006534|GO:0030170|GO:0031071
Bpe01g00337 979 SUPERFAMILY Cyclin-like 706 841 IPR036915 -
Bpe01g00337 979 CDD CYCLIN 745 834 IPR013763 -
Bpe01g00337 979 SMART Cyclin_C_2 844 963 IPR004367 -
Bpe01g00337 979 SMART cyclin_7 751 835 IPR013763 -
Bpe01g00337 979 SMART cyclin_7 848 932 IPR013763 -
Bpe01g00337 979 Pfam Aminotransferase class-V 90 377 IPR000192 -
Bpe01g00337 979 Pfam Aminotransferase class-V 408 500 IPR000192 -
Bpe01g00337 979 Gene3D - 717 959 - -
Bpe01g00337 979 Gene3D - 101 361 IPR015421 GO:0003824
Bpe01g00337 979 CDD CYCLIN 842 931 IPR013763 -
Bpe01g00337 979 Gene3D Aspartate Aminotransferase, domain 1 74 504 IPR015422 GO:0003824
Bpe01g00337 979 PANTHER CYCLINS 590 965 IPR039361 -
Bpe01g00337 979 Pfam Cyclin, C-terminal domain 845 961 IPR004367 -
Bpe01g00337 979 Pfam Cyclin, N-terminal domain 719 841 IPR006671 -
Bpe01g00337 979 MobiDBLite consensus disorder prediction 572 594 - -
Bpe01g00337 979 SUPERFAMILY PLP-dependent transferases 74 508 IPR015424 -
Bpe01g00337 979 Gene3D - 731 842 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00337 Bpe-Chr1:2116089 Bpe04g00534 Bpe-Chr4:3391110 4.74E-103 dispersed
Bpe15g00279 Bpe-Chr15:14248451 Bpe01g00337 Bpe-Chr1:2116089 4.24E-21 dispersed
Bpe01g00337 Bpe-Chr1:2116089 Bpe02g00023 Bpe-Chr2:208686 2.03E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00337 K11717 - qsu:111987311 721.079