Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00340 | ATGGTCATCAAGCTAAAAGAAGAGCTCATCATGAACTCCTTCAAAACAATCGATGGTCGCGGCGTCAGCGTCCACATCGCCGGCGGACCTTGCATTACGATTCAGTACGTGACCAACATCATAATTCACGGCCTCAACATTCACGATTGCAAGGCCGGAGGAAACGCCTACGTGAGAGACTCCCCGGACCATTACGGGTGGCGTACGAGGTCGGACGGAGATGGGGTTTCGATCTTCGGAGGAAGCCATATTTGGGTGGACCATTGCACTCTGTCAAACTGCAATGATGGTCTGATAGACGCCATTCAAGGATCTACAGCCATTACCATATCCAACAATTATATGACTCACCATAACAAAGTCATGCTCTTGGGCCACAGCGATTCCTACCCACTAGACAAGAACATGCAAGTGACCATAGCTTTCAACCATTTCGGAGAAGGACTAGTCCAGAGAATGCCCAGGTGCAGGCATGGGTATTTCCATGTCGTGAATAATGACTATACGCATTGGGAGATGTACGCGCTTGGAGGTAGTGCGGGTCCGACAATCAACAGCCAAGGCAACAGATTTGTAGCGCCAAACGACGCCGACAGCAAAGAGGTGACGAAGCACGAGGACGCAGCAGAGAAAGAATGGAGAAAGTGGAATTGGAGGTCGGAGGGAGATTTGATGCTAAACGGAGCGTTTTTCACGAGATCTGGTGCAGGCGCATCTTCCAACTACGCTAAGGCGTCGAGTCTGAGCGCAAGGCCCTCGTCGCTTGTCAGTTCACTCACCGGCGGCGCCGGTGCTCTTAGTTGCAAGAAGGGTTCTCGCTGCTGA | 825 | 51.64 | MVIKLKEELIMNSFKTIDGRGVSVHIAGGPCITIQYVTNIIIHGLNIHDCKAGGNAYVRDSPDHYGWRTRSDGDGVSIFGGSHIWVDHCTLSNCNDGLIDAIQGSTAITISNNYMTHHNKVMLLGHSDSYPLDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYALGGSAGPTINSQGNRFVAPNDADSKEVTKHEDAAEKEWRKWNWRSEGDLMLNGAFFTRSGAGASSNYAKASSLSARPSSLVSSLTGGAGALSCKKGSRC | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2143751 | 2145082 | - | Bpe000330.1 | Bpe01g00340 | 97588 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00340 | 274 | Pfam | Pectate lyase | 12 | 191 | IPR002022 | - | |
Bpe01g00340 | 274 | PANTHER | PECTATE LYASE | 1 | 271 | - | - | |
Bpe01g00340 | 274 | SMART | amb_all | 1 | 197 | IPR002022 | - | |
Bpe01g00340 | 274 | PANTHER | PECTATE LYASE 18-RELATED | 1 | 271 | IPR045032 | GO:0030570 | |
Bpe01g00340 | 274 | Gene3D | - | 1 | 267 | IPR012334 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 245 | 268 | IPR018082 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 72 | 93 | IPR018082 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 174 | 193 | IPR018082 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 8 | 24 | IPR018082 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 216 | 240 | IPR018082 | - | |
Bpe01g00340 | 274 | PRINTS | Pollen allergen Amb family signature | 152 | 171 | IPR018082 | - | |
Bpe01g00340 | 274 | SUPERFAMILY | Pectin lyase-like | 1 | 273 | IPR011050 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00340 | Bpe-Chr1:2143751 | Bpe15g00661 | Bpe-Chr15:17324303 | 2.72E-169 | dispersed | |
Bpe04g01058 | Bpe-Chr4:7873781 | Bpe01g00340 | Bpe-Chr1:2143751 | 1.53E-160 | transposed | |
Bpe01g00340 | Bpe-Chr1:2143751 | Bpe08g00306 | Bpe-Chr8:1832348 | 5.23E-172 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00340 | K01728 | - | mnt:21410245 | 519.235 |