Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00379 ATGAGAGTGCTCGTCAATGCTGCAACGGGAGAGAATCGAGTTTTCACTTCATGGAAATCCGAAAGCGATCCATCCGTCGGAAACTATACTTTAGGCGTTGATCCTCGAGGATCCCCTCAGATTGTGATTTGGGAGGGACGAACTAGAAGGTGGAGAAGCGGCCATTGGGATTCACAGAAATTTAATGGCGTTCCCAACATGAGTGCGAGCTTGTTGTATGGATTTGGACTGTCCCCACGTGATGAAGAAGGAAATAGGTATTTCACTTACACACCACTGAACAGTTCGGATTATTTAAGGTTTAAGATACACTGGAATGGACAAGAAGAGCAGCTGAGGTGGGAACAAAATCTGCAGCAATGGACTGTCATGCAAGAACAGCCTTCTAGCGAATGCGAGCTCTACAACCTGTGCGGAAATTTTGCTGTCTGCACTGAATCCAATTCGCCGAAATGCAGTTGTATCGATGGGTTTGTACCTAAGAACTCGGATCAATGGAGCAATGGCAACTGGTCTGGTGGGTGTGTGAGGAGGACTCCATTACTATGCCAGAGGAGTAGTAGTAATGGAACAGAGGAAGATAATCAAGAAGATGGGTTTTCCACTATGAATGGCTTGAAATTGCCTGATTTTGTGGATTTGGTGGTTGTGGGTTATATGGAAACTTGCAGAGTCAAATGCTTGGTCAATTGTTCTTGTACTGCATATGCTGATGTTACGGGGATCGGATGCATGATTTGGAGCGGGGAATTGATCGATATGCAGCATTTTGATGACGCCGGGAGCAGTCTTAATATTCGTCTTGCCCATTCTGAATTAGACTTGTTTATCGACTCGATTACACAATTATGTGTAGGAAATGAGAGGAAACGATCAACCTCCGTCGTTATAGCTATCTCCATAGCTGGAGTAGTCTTCCTAGCTATAGTCATTGGGTTATTGTGGAAATACAGGGAAAAACTGAAAGGTTGCAAGAGCAGAGATTTTTCGAAGGACTTTTCAGGACAGTCTGATTTTGGCATCGATAGGGATGAAACAAACGGACCAGAACTGCAATTTTATACTTTCAATTCTGTAGCAGCTGCTACTGACAATTTTTCTGATAAAAGCAAGCTCGGACAGGGAGGGTTTGGTCCGGTATACAAGGGAATGCTTCCAGGCAGGAAGGAAATTGCAGTGAAGAGACTCTCAGTAAGATCTGGGCAAGGCTTTGAAGAGTTTAAGAATGAAATTTCTCTTATTGCCAAGTTACAACATAGAAATCTTGTTAGACTTTTAGGTTACTGTGTTGAAGGGGAAGAAAAGATGCTGCTTTATGAATACATGCCTAATAAAACAGATTCATCGCAGCAGGCACTACTGGATTGGTCAACGCGTTTCAAAATCATTGAAGGGATTGCCCGGGGGCTCCTTTACCTCCATCGCGATTCGAGGCTTAGAATAATTCATAGAGATCTAAAGGCAAGTAACATTTTGTTGGATGAAGACATGAATCCTAAGATATCGGACTTTGGAATGGCGAGAATATTTGGGGCAAACGAAGATGAAGCAAATACGAATCGCGTTGTGGGCACTTATGGCTATATGGCTCCAGAATATGCAATGGAAGGTCTATTTTCGGTGAAATCAGACGTTTATAGCTTTGGCGTTTTGTTACTTGAAATCGTATGCGGCAGGAGGAACAATAGCTTTCGGACATCCGATCAGTCAAGTCTTATTGGCCATGCTTGGCATCTATGGAACGAGAGAAAACCAATGGATCTTCTAGATTCTTCTATTCGGGAAGCGAGTTCGAGTTCAAGCGATGAAGTTTTGAGATGCATACACGTGGGAATGTTGTGCGTACAAGACTCCCCGCTCTTGAGACCAACAATGTCCTCTGTTGTGTTGATGTTAGAGAGTGAATCTACTTCTCGACCTCTGCCTAGACAACCCACTTATACTTCGATCAGAAACTCGACGATCGTCTCCTCCGCCGACGTTTTCGAGCTCGGGTTTTTTCAACCTGGAAATTCCGGCTGGTATTTGGGACTTTGGTATAAGAATATTCCGGTTCGGACTATCGTTTGGGTTGCTAATAACGACCGTCCTCTCTCGGATTCTTTAGGAGTTTTGAAATTTGGGGATGGGAAACTGGTTCTTCTTGATTCGGATGGTAATTCAACGTGGTCAGCGACCAACCAAACTTCCGGCAGCAATCCGATTCTGCAGCTTCTTGATTCGGGAAACCTCGTTATCAGGGAAGCAAACGACGACGACCCAGAAAATTATGTCTGGCAAAGCTTTGATTTTCCGACGGATACTTTGCTGCCGGGAATGAAGCTAGGATGGGATTTGAATACTGGTCAGAACAGATATATAACGTCATGGAAAAACTTCGATAACCCTTTTCCCGGCGACTATTCTTTCAAACTCGAATACAAAGGATTCCCGGAGATTTTCTTAACAGCCAAAAACGAAAGGGTATATCGTAGCGGGCCATGGAATGGGCAGAGATTCAGCGGTGTGCCGGAAATGACACCGATCGACGGTTTATCCTTCAGTTTTGTAACGAATCAGGAAGAAGTTTACTACTCGTTTTCGACAACGAACACTTCGTTACATTCGAGATTAACAGTGACCGGAACTGGATCGCTCCAACGCTATATATGGATTCACAGCACCCAAACATGGAATTTATTCTGGTACGCTCCGAAAGATCAATGCGATTATTACAGAGAGTGCGGTCCGTTTGGGATATGCGATTCGAACTCCTCTCCAGTTTGCAAATGCGCAACTGGGTTTCAGCCCAAGAATTTGCAGGCGTGGAATCTGAGAGACGGGTCGGACGGTTGCGTGAGAAAAACCGAGTTGAACTGTTCAAACGACAAGTTTTTGCTAAGGAAGAAGATGAAGTTGCCGGAGAGTACGACGGCGGTTGTGAACAGGAGTATGAATCTCGACGATTGCCGGGAAGTTTGCCTGAAGAATTGCTCTTGCACTGCTTTCGCCAACACTAACATCAGCAATGGCGGAAGTGGCTGCGTGACCTGGAGCGGCGAGCTCTGGGATTTGAGGGTTTATGCTGAAGGTGGCCAAAATCTGTACGTAAGATTGGCTGCTTCTGATCTTGAGGATGACGGCGACGGGCGACGAGGTTCGACGGGGAAGAAGAGAGTGATTATTATAGCTGTCGTCGTCTCTGTCTGCGTCGCCATTCTTTTGTCTGGAGTTGCTTTCTGTTTTCTGGGGAAGAAGAAGACGCCAAAGACTCTGTTGAAAAACCAGGTGGTTATACAGAATAAGAGGGATTGCTCCGGTGAATGTGGGGAAGATGAACTTGATCTTCCTCTGTTTGACTTCGCCACCATTGCCATGGCCACCGATAGCTTCTCCGAGGAAAATAAACTCGGACAAGGAGGCTTTGGCGGCGTTTATAAGGGTAGGTTGGTTGAAGGTCAAGAAATAGCAGTGAAGAGGCTGTCAAAGACGTCAGTTCAAGGAATGGAAGAGTTCAAGAACGAGATGAAGTTGATAGCCAGGCTTCAACACAGAAATCTGGTTCATAAGGCGAAGAAGCCATTGCTGGACTGGCCTAAACGTTTCAATATAATATGTGGGATAGCTAGAGGCCTTCTTTATCTTCACCAAGATTCCAGGTTTAGAATCATCCACAGAGATCTCAAGGCAAGTAACATTCTTCTCGACGGGGAAATGAATCCCAAAATTTCAGATTTCGGAATGGCGAGAATTTTCGGAACGGATCAAACCGAAGCAAATACTAGGAAGGTTGTCGGAACATATGGGTACATGTCGCCAGAATATGCCATGGACGGCCTCTTCTCGGTGAAATCCGATGTCTTCAGCTTCGGAGTTTTGGTTTTGGAAATCATTGGTGGTAAAAAGAATAGGGGGTTTTACTATGCAAATAATGAGCTAAACCTTCTAGGATATGCTTGGAAACTATGGAAAGAAAATAAGGTTTTGGAGGTGACGGATCCAACCATGGGTGATTCATATTCACCAACAGAAGTTCTGAGATGTATACAAGTAGGTCTTTTATGTGTTCAAGAACGGACCGAAGATCGGCCAACCATGGCTTCCATCGTCCTAATGCTTAGCAGCGATACGGCCACAATGCCGCAGCCCAAAAGCCCGGGATACTGTGTCGGAAGAAACGAAATGGACTCGTCAACGAGTAGGGTAGATGAATCATGCACTGTAAACCAAGTTACAGTCACAATACTTGAAGCTAGGTAG 4239 44.96 MRVLVNAATGENRVFTSWKSESDPSVGNYTLGVDPRGSPQIVIWEGRTRRWRSGHWDSQKFNGVPNMSASLLYGFGLSPRDEEGNRYFTYTPLNSSDYLRFKIHWNGQEEQLRWEQNLQQWTVMQEQPSSECELYNLCGNFAVCTESNSPKCSCIDGFVPKNSDQWSNGNWSGGCVRRTPLLCQRSSSNGTEEDNQEDGFSTMNGLKLPDFVDLVVVGYMETCRVKCLVNCSCTAYADVTGIGCMIWSGELIDMQHFDDAGSSLNIRLAHSELDLFIDSITQLCVGNERKRSTSVVIAISIAGVVFLAIVIGLLWKYREKLKGCKSRDFSKDFSGQSDFGIDRDETNGPELQFYTFNSVAAATDNFSDKSKLGQGGFGPVYKGMLPGRKEIAVKRLSVRSGQGFEEFKNEISLIAKLQHRNLVRLLGYCVEGEEKMLLYEYMPNKTDSSQQALLDWSTRFKIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIFGANEDEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVCGRRNNSFRTSDQSSLIGHAWHLWNERKPMDLLDSSIREASSSSSDEVLRCIHVGMLCVQDSPLLRPTMSSVVLMLESESTSRPLPRQPTYTSIRNSTIVSSADVFELGFFQPGNSGWYLGLWYKNIPVRTIVWVANNDRPLSDSLGVLKFGDGKLVLLDSDGNSTWSATNQTSGSNPILQLLDSGNLVIREANDDDPENYVWQSFDFPTDTLLPGMKLGWDLNTGQNRYITSWKNFDNPFPGDYSFKLEYKGFPEIFLTAKNERVYRSGPWNGQRFSGVPEMTPIDGLSFSFVTNQEEVYYSFSTTNTSLHSRLTVTGTGSLQRYIWIHSTQTWNLFWYAPKDQCDYYRECGPFGICDSNSSPVCKCATGFQPKNLQAWNLRDGSDGCVRKTELNCSNDKFLLRKKMKLPESTTAVVNRSMNLDDCREVCLKNCSCTAFANTNISNGGSGCVTWSGELWDLRVYAEGGQNLYVRLAASDLEDDGDGRRGSTGKKRVIIIAVVVSVCVAILLSGVAFCFLGKKKTPKTLLKNQVVIQNKRDCSGECGEDELDLPLFDFATIAMATDSFSEENKLGQGGFGGVYKGRLVEGQEIAVKRLSKTSVQGMEEFKNEMKLIARLQHRNLVHKAKKPLLDWPKRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDGEMNPKISDFGMARIFGTDQTEANTRKVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIIGGKKNRGFYYANNELNLLGYAWKLWKENKVLEVTDPTMGDSYSPTEVLRCIQVGLLCVQERTEDRPTMASIVLMLSSDTATMPQPKSPGYCVGRNEMDSSTSRVDESCTVNQVTVTILEAR 1412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2376914 2385447 - Bpe000367.1 Bpe01g00379 97627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00379 1412 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1180 1411 - -
Bpe01g00379 1412 Pfam S-locus glycoprotein domain 823 932 IPR000858 GO:0048544
Bpe01g00379 1412 Pfam S-locus glycoprotein domain 51 162 IPR000858 GO:0048544
Bpe01g00379 1412 ProSiteProfiles Protein kinase domain profile. 366 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00379 1412 SUPERFAMILY Protein kinase-like (PK-like) 1108 1388 IPR011009 -
Bpe01g00379 1412 SMART egf_5 131 176 IPR000742 -
Bpe01g00379 1412 SMART egf_5 901 946 IPR000742 -
Bpe01g00379 1412 Pfam Protein kinase domain 367 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00379 1412 ProSitePatterns Protein kinases ATP-binding region signature. 1130 1152 IPR017441 GO:0005524
Bpe01g00379 1412 CDD STKc_IRAK 372 633 - -
Bpe01g00379 1412 SUPERFAMILY alpha-D-mannose-specific plant lectins 674 829 IPR036426 -
Bpe01g00379 1412 ProSiteProfiles Protein kinase domain profile. 1124 1373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00379 1412 Gene3D Phosphorylase Kinase; domain 1 1101 1179 - -
Bpe01g00379 1412 ProSiteProfiles Bulb-type lectin domain profile. 640 759 IPR001480 -
Bpe01g00379 1412 Pfam D-mannose binding lectin 687 791 IPR001480 -
Bpe01g00379 1412 SMART ntp_6 953 1032 IPR003609 -
Bpe01g00379 1412 SMART ntp_6 195 268 IPR003609 -
Bpe01g00379 1412 CDD B_lectin 652 765 IPR001480 -
Bpe01g00379 1412 Pfam PAN-like domain 953 1018 IPR003609 -
Bpe01g00379 1412 Pfam PAN-like domain 195 254 IPR003609 -
Bpe01g00379 1412 CDD PAN_AP_plant 179 269 - -
Bpe01g00379 1412 Pfam Domain of unknown function (DUF3403) 1368 1412 IPR021820 GO:0004674
Bpe01g00379 1412 Gene3D - 645 762 IPR036426 -
Bpe01g00379 1412 SUPERFAMILY Protein kinase-like (PK-like) 351 661 IPR011009 -
Bpe01g00379 1412 Gene3D Transferase(Phosphotransferase) domain 1 440 644 - -
Bpe01g00379 1412 Gene3D Transferase(Phosphotransferase) domain 1 1180 1377 - -
Bpe01g00379 1412 ProSiteProfiles PAN/Apple domain profile. 953 1033 IPR003609 -
Bpe01g00379 1412 SMART blect_4 646 765 IPR001480 -
Bpe01g00379 1412 ProSiteProfiles EGF-like domain profile. 128 164 IPR000742 -
Bpe01g00379 1412 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 649 - -
Bpe01g00379 1412 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 650 1182 - -
Bpe01g00379 1412 CDD PAN_AP_plant 949 1033 - -
Bpe01g00379 1412 ProSiteProfiles PAN/Apple domain profile. 183 269 IPR003609 -
Bpe01g00379 1412 Pfam Protein tyrosine and serine/threonine kinase 1127 1182 IPR001245 GO:0004672|GO:0006468
Bpe01g00379 1412 Pfam Protein tyrosine and serine/threonine kinase 1184 1364 IPR001245 GO:0004672|GO:0006468
Bpe01g00379 1412 PANTHER - 1 649 - -
Bpe01g00379 1412 PANTHER - 650 1182 - -
Bpe01g00379 1412 PANTHER - 1180 1411 - -
Bpe01g00379 1412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Bpe01g00379 1412 SMART serkin_6 366 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00379 1412 SMART serkin_6 1124 1366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00379 1412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1216 1228 IPR008271 GO:0004672|GO:0006468
Bpe01g00379 1412 Gene3D Phosphorylase Kinase; domain 1 338 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00379 Bpe-Chr1:2376914 Bpe08g00331 Bpe-Chr8:1970054 5.33E-113 dispersed
Bpe11g01168 Bpe-Chr11:8659570 Bpe01g00379 Bpe-Chr1:2376914 3.40E-160 transposed
Bpe12g00233 Bpe-Chr12:2042979 Bpe01g00379 Bpe-Chr1:2376914 4.68E-123 transposed
Bpe01g00379 Bpe-Chr1:2376914 Bpe11g00514 Bpe-Chr11:3971230 5.59E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63115 PF00069 Pkinase 6.20E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00379 - - tcc:18596995 1340.1