Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00444 ATGGAGGGTGAGGCTTCGGATGAAGAAAATCGAAATCTTGACGATGGCGATAATAATAAGACTAGCAACTCGAATGAAGGTATAGGCAAGCCTAAGCGGCAGATGAAGACTCCGTTTCAGCTTGAAACTCTTGAGAAGGCCTATGCCGTGGAAACTTATCCAGGCGAGTGCAGTCGCATAGAACTGTCAAAGAAATTAGGATTGACGGATAGGCAATTGCAGATGTGGTTTTGTCATAGAAGGTTGAAGGACAAGAAGGAAGCACCTGCTAAAAAAAATGTGAAGATGGTGCCAACAGCTCTGCCGGATTCTCCTAGTGATGATTTGAGAATGGGGGCTGGTCCAGGTAGTGATTATGGGTCTGGGTCAGGTTCTAGTCCGTTTGGTCACACTGACGTACGCAATGCAATGCCTTGGAGTGGTGGAGATGATATTCGAACGATGAGAAAGTTTCATGAGCCTTCTCAGTCTTTAATGGAGCTCAGAGCTATTGCCTGTGTAGAAGCACAGCTAGGGGAGCCATTGAAGGAAGATGGGCCAATTCTTGGAATAGAATTTGATTCTTTACCTCCTGATGCATTTGGAGCACCTATTGAAGTAGCGACGGAGCAACTGAAAAGGTCTGGGAATCTTTATGATGAAAGAACATATGAACGAAGAGATTCAAAGTCAAATAAAGCTACTCCAAGAACTTTTCATGACTTTTCCTATCTTCAAGATGTGTCCAGTATAAGACCTGATATATATGGACAAATTACACAATCGCATTATGCTGATTCTGTAGTTGAAGTGCCATCTGCCAGGACATCATCATTCTTGCATGGTAATGAACAGTCAACAAGGAGCCATGGTTTTCATGGTTATCTTCCACGTGCTCGTCAATTGTCTCAAAAAGATAAGGAAGGGATTGCAATCCCATCACCTTCCGGAGATGATGACTTTATTCCTCCAAGGAATTCTTACACAAACAACAGAATAAATGATCAGTTAACTGATCATCCAGCTATTGGACCAGAAAATCCATATTTATCATCTGATGGACGCAGTTTTCAAAATGATGATATTCTATGGATGGAAAGGAAACATAAGAGTGGAGCACAAATCTCTAAAGAAGGTGAAGCTCATGAGATACGAATTCGGAAAGAACTGGAGAAACAAGATGCTCTGAGAAAAAAGGGTGAAGAACGAATAAGGAAAGAAATGGAAAAGCAAGACCGTGAAAGGAAAAAGGAGGAAGAAAAGTTACTGCGTGAAAGGCAACGGGAAGTAGAGAGATTAAAGCGTGAGAAAATAAGGGAGAATGAACGCAGGGAAAGGTTTCTGGAGAAAGAAAATATGAGAGCCGAGAAAAGGAAGCAAAAGGAAGAACTTCGCAAGGAAAGAGAGGCAGTAAGACGCCAAGTTGCAGTTGAAAAGGCCAATGCACGGAGAATCGCTAGAGAATCTATGGAGCTAATTGAGGATGAACAACTGGAGCTGATGGAACTGGCTGTTGCAAGGAAAGGTTTATTGTCAATAGCAAATCTTGATTATGACACCTTGCAAAATCTTGATTCATTCAGAGGTAGGACTACATTGCTATCCGCTATTGGTTCAGATTTTATAGGTTCCTTTCCACCAAAGACTGTGCATCTGAAAAGACCGTTTGGAGTGAAACCCTGGACCATATCAGAGGAGAATATTGGAAACCTTCTCATGGTTTGGAGATTTTTAATTACATTTGCGGATGTTCTAGAATTGTGGCCTTTTACTCTCGATGAGTTTGTTCAAGCCTTTCATGACTATGATTCCAGATTGTTGGGAGAAATTCATATTTCTCTCCTGAGGTTGATTATTAAAGACATTGAAGATGTTGCAAGGATGCCTTCAACTGGATTGGGGATGAATCAAAATGGTGTTGTCAATCCTGGAGGTGGACATCCTCAGATTGTTGAAGGGGCGTATGCGTGGGGCTTTGACATTTGCAAATGGCAAAGACATTTAAATCCTTTAACATGGCCAGAAATATTTCGACAGTTAGCACTTTCTGCCGGATTTGGACCACAGTTAAAGAAAAGAAGTATAAAATGGTCAGACGCCCGTGATAACAATGAGAGTAAAGGGTGTGAAGATGTGGTTTCTACTCTACGCAATGGTTCGGCAGCAGAAAATGCTTTTGTGTTGATGCAAGAGAGAGGATTGTTAGCTCCGCGGAAATCCAGGCATCGTTTGACTCCTGGAACTGTCAAATTTGCCGCTTTTCATGTTCTATCACTGGAGGGAAGCAAAGGACTTACAGTAGTAGACCTTGCTGACAAGATTCAGAAATATGCACTTAGAGATCTATCAACAAGCAAAACACCGGAGGCTTCTATATCAGTTGCCTTGACAAGGGATACTAAGCTTTTTGAGAGAATAGCTCCATCAACTTATCGGGTGAGAGCTCCCTACAGAAAGGATCCTATTGATTCTGAGGAGATACTGTCATCTGCTAGGAAGAAAATTCAGATATTTCAAAATGGGTTTTTGCCTTGCGAAGATGTTGAACGTGATGAAGAATCTGAATGCGACGATATTGATGAGGACCCTGAAGTTGACGATATAGGTACTCCTACCTTAGAAAATAAAAATGCTGATAAGAGAAATGAAGAAGAATCTTGCGTAGGAAATGGGAAAGAAACTTTATGCCCAGATGTATTATCAACTCCACAAAATGAGTTTGACAAAGATATGACCACCTTCCCATTTAGTGTTTCTAACGATGCAAAATATTCAGTTTCTGATGCAAAGCAATATAGTTGTGTTCCTGAAATTACTAATCTTGATCAAGAAAATATGGAGATTGATGAAAGCAAGGCTGTAAATTTAAATCATCAAACTCACTTGAATTTATTGTCAATAATTATACAGGATCGTCTGGAGGCTGCAAATGCACTTAAAAAGCAAATGTGGGCAGAGGCACAGGTTGATAAAAGTCGCCCAAAAGATGAGCTTGTACCTAAATCTGATTTTCCATCTGTCATAGGGATCAAAGCAGAAGCGCAACATTGTTCTACGCTAGATGGTGGCCAAAGCCCATTTCCTGATGTTGACAATAGGAATAATCAAGTATCTCCTAGTAATGCTGAAAACCAAAAATCACTAAATGGTTTTCGAACCGATCAAGATCTTCTTAACTGTTCACGTGATGAAAAGGGCTCTGTGCCACAAGATTTTTCAGTCAGTCAAGATAATTTGTTGCAGCAGATTGGCAATGCAACAAAAAAGTCACGGTCGCAGTTAAAATCTTATATTGGCTTCAGAGCAGAAGAGATGTACACATATAGATCATTACCCCTTGGCCGCGATCGCAAGCGCAATCGATATTGGCAATTTGTTGCATCTGCTTCGAGTAATGACCCTGGTTCTGGTAGGATCTTTGTTGAATTAAATGATGGTCGTTGGAGGCTTATTGACTCAGAAGAGGCTTTTGATTCTCTTTTGATCTCCTTGGACACACGTGGGATTAGAGAATCAAATTTGCGCTTAATGTTGCAAAACATTGAGACATTCTTCAAGGAAAATGTCAGAAGGTCCGTTCAGCTAAATAATCTGGTGGTTGCTAGTGGAACTTGTGTGAAAAGTTGTGCTGATGAAATGGAATGTAGTCCTACCCCTCCTGCTGCTTTGGACAGTCCAAGCAGTGCTGTTTGTGCCTTGAATTTAGATATGATGGTAACCTCATCTTCATTCAAAATTGACCTTGGGAGAAATGAAACTGAGAAGCAAGCTGCCTTGAAAAGATATCAAGAATTTCATAGATGGGCATGGAGTGAATGCTTAAATACATTATCTGCTACGAAGTACGGAAAGACGAGATGCAAGCAGCTGTTAGACAATTGCAAGCCCTGTCTTAGCTCATATAACTCCGAACATTCCCATTGCCCTTCTTGCCATCAAACTTTTGACAACAATGGCTTGAATTTCTCTGATCACCTAATTTATTGTGAAGAAAGTAGAAAGCTTAAGCATGGGGAATTGCTTGCTTTAGATTCTACTCTCCCTCTTGGAAGCGGATTGGTGAAGACTGTGTTGGCTCTCATTGAGTCATCTATACCATCAGAAGCTTTAGAATCATGTTGGACTGAAGAGCATCGAAGGACTTGGGGCCTGAAGTTAAATATGTCATCATCCATTGAAGAGCTTCTTCAGATGTTGACCCAATTGGAGAGATTGATAAAGCGAAACTCTCTGTCTTCAAGTTTTTCAACTACACAGGAGCTTTTGGGCTCCATGGCTCCATTGAATTTATCTCATGATCCAAAAGATTATGGCTCAGACTCCATTCTGCCATGGATACCACGAACAGTTTCTGCAGTTTCTTTGAGACTTTTTGAATTAGATGCTTCCATTATGTACTGTCAATCTCAGAAATCTGAGCCTCCACGTGCTCCAATGAAGGAAAGCATGAAGAACGAATTATGCGATCTAGACTATGGGGATTTGATGAGAGAAGATCATTCTGTTGGTTTAAGTAATGCTCGGAACAGATCCAAACGTGGCCGCGGGGATTCGGAGCAAGGACGAGGTAAGAAGTGGCAGAGACAAGCTAATAACTCCAAAACAAATTACACTCGACGGGTCAATAAGACAAGTGAGAAGTCTAACCAAGGACTAAGACGAATGGGGCAAGGTTCACATGCGCAGGGTGGACGTGGACGCCGTACCATTCGTAAGAGGAGAGCTGAAACTACCAATAAAGCGTTGCTCGGACAAATTAATAAACAGGTCCTCCAAAGTATAGGTGATGCTCCAAAAGATTTTAGCTTAGATTGGGATGGTGATGAAAAGATCAATACAGATATTAGAAAAGAAGAGGATGACATTGACAATATCGATGCGATCGACTCTGATGACGATGCTCGGGTTGCAGGATTTGACGGAGGGAATTGGGATGTCCAATCAGAAGGTCCTTCGAACACGTGGAAGGAAGATGCGATGGAAGGAAGTGACGAAGATGTGGATGCATTTGAAGACGACAACGTCGTAGAAGAGGCGGGAAACGAGGATTCAGAAGGGGAGGCTGATTTGAGTGAGGATGTTTCAGATGGAATGGAAAATGGTGAAGGCGGAGACTCATCTGTTTCTGAGGATTACAGTGATTGA 5124 41.53 MEGEASDEENRNLDDGDNNKTSNSNEGIGKPKRQMKTPFQLETLEKAYAVETYPGECSRIELSKKLGLTDRQLQMWFCHRRLKDKKEAPAKKNVKMVPTALPDSPSDDLRMGAGPGSDYGSGSGSSPFGHTDVRNAMPWSGGDDIRTMRKFHEPSQSLMELRAIACVEAQLGEPLKEDGPILGIEFDSLPPDAFGAPIEVATEQLKRSGNLYDERTYERRDSKSNKATPRTFHDFSYLQDVSSIRPDIYGQITQSHYADSVVEVPSARTSSFLHGNEQSTRSHGFHGYLPRARQLSQKDKEGIAIPSPSGDDDFIPPRNSYTNNRINDQLTDHPAIGPENPYLSSDGRSFQNDDILWMERKHKSGAQISKEGEAHEIRIRKELEKQDALRKKGEERIRKEMEKQDRERKKEEEKLLRERQREVERLKREKIRENERRERFLEKENMRAEKRKQKEELRKEREAVRRQVAVEKANARRIARESMELIEDEQLELMELAVARKGLLSIANLDYDTLQNLDSFRGRTTLLSAIGSDFIGSFPPKTVHLKRPFGVKPWTISEENIGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHISLLRLIIKDIEDVARMPSTGLGMNQNGVVNPGGGHPQIVEGAYAWGFDICKWQRHLNPLTWPEIFRQLALSAGFGPQLKKRSIKWSDARDNNESKGCEDVVSTLRNGSAAENAFVLMQERGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLTVVDLADKIQKYALRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPIDSEEILSSARKKIQIFQNGFLPCEDVERDEESECDDIDEDPEVDDIGTPTLENKNADKRNEEESCVGNGKETLCPDVLSTPQNEFDKDMTTFPFSVSNDAKYSVSDAKQYSCVPEITNLDQENMEIDESKAVNLNHQTHLNLLSIIIQDRLEAANALKKQMWAEAQVDKSRPKDELVPKSDFPSVIGIKAEAQHCSTLDGGQSPFPDVDNRNNQVSPSNAENQKSLNGFRTDQDLLNCSRDEKGSVPQDFSVSQDNLLQQIGNATKKSRSQLKSYIGFRAEEMYTYRSLPLGRDRKRNRYWQFVASASSNDPGSGRIFVELNDGRWRLIDSEEAFDSLLISLDTRGIRESNLRLMLQNIETFFKENVRRSVQLNNLVVASGTCVKSCADEMECSPTPPAALDSPSSAVCALNLDMMVTSSSFKIDLGRNETEKQAALKRYQEFHRWAWSECLNTLSATKYGKTRCKQLLDNCKPCLSSYNSEHSHCPSCHQTFDNNGLNFSDHLIYCEESRKLKHGELLALDSTLPLGSGLVKTVLALIESSIPSEALESCWTEEHRRTWGLKLNMSSSIEELLQMLTQLERLIKRNSLSSSFSTTQELLGSMAPLNLSHDPKDYGSDSILPWIPRTVSAVSLRLFELDASIMYCQSQKSEPPRAPMKESMKNELCDLDYGDLMREDHSVGLSNARNRSKRGRGDSEQGRGKKWQRQANNSKTNYTRRVNKTSEKSNQGLRRMGQGSHAQGGRGRRTIRKRRAETTNKALLGQINKQVLQSIGDAPKDFSLDWDGDEKINTDIRKEEDDIDNIDAIDSDDDARVAGFDGGNWDVQSEGPSNTWKEDAMEGSDEDVDAFEDDNVVEEAGNEDSEGEADLSEDVSDGMENGEGGDSSVSEDYSD 1707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2711147 2722790 - Bpe000429.1 Bpe01g00444 97692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00444 1707 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 1 1707 - -
Bpe01g00444 1707 ProSiteProfiles HARE-type HTH domain profile. 740 809 IPR007759 GO:0006355
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1 38 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 387 414 - -
Bpe01g00444 1707 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1518 1549 - -
Bpe01g00444 1707 ProSiteProfiles DDT domain profile. 558 617 IPR018501 -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1495 1563 - -
Bpe01g00444 1707 Pfam HB1, ASXL, restriction endonuclease HTH domain 740 808 IPR007759 GO:0006355
Bpe01g00444 1707 Pfam Homeodomain 30 86 IPR001356 GO:0003677
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 302 324 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1634 1707 - -
Bpe01g00444 1707 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1707 IPR044977 GO:0006357
Bpe01g00444 1707 Gene3D - 5 88 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 866 881 - -
Bpe01g00444 1707 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 97 141 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1021 1044 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1654 1692 - -
Bpe01g00444 1707 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1102 1174 IPR028941 -
Bpe01g00444 1707 CDD homeodomain 32 87 IPR001356 GO:0003677
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1011 1044 - -
Bpe01g00444 1707 Pfam DDT domain 559 614 IPR018501 -
Bpe01g00444 1707 SMART testlast3 558 617 IPR018501 -
Bpe01g00444 1707 Coils Coil 394 474 - -
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 848 885 - -
Bpe01g00444 1707 SMART HOX_1 29 91 IPR001356 GO:0003677
Bpe01g00444 1707 MobiDBLite consensus disorder prediction 1495 1517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00444 Bpe-Chr1:2711147 Bpe07g00637 Bpe-Chr7:13084786 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20786 PF15613 WSD 4.90E-14 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00444 - - jre:108984176 1882.46