Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00451 ATGGGTGGTCTGATCGATTTGAACACGACGGAGGACGACGAGACTCCGTCTTTTGCCAGTTCCCCTGATTCGTCTTCATCTGCTTCTGGTTCTACTTCACCGGTTCCATTTTGCTGGGAGCTATGGCACGCCTGCGTTGGTCCTCTGATTTCTTTGCCGAAGAAAGGTAGTGTAGTCGTTTATTTACCGCAAGCTCACTTGGAGATAGCCAGAGATTTTCCAGCCGGAGCCTATGAACTTCCTTCTCACCTCTTCTGTCGTGTTCTTGACGTTCAGCTCCAAGCAGAGGCAGGAACTGATGAGGTTTCCGCTCGGATTTCTCTGGTTCCAGAAAGTCAGAATTTTGAGCAGAAGCTGCAAGAAGGGGAAATAAATGCAGATAATGTCGGAGACGATTTCGAAGCAGCCGTGAAGTCAACCACACCTCATATGTTCTGCAAGACTCTAACTGCTTCAGATACTAGCACTCATGGTGGCTTCTCCGTCCCCCGTCGAGCTGCTGAAGATTGCTTTCCTCAGTTGGATTATAATCAGCAGAGGCCTTCACAAGAGCTTTCGGCAAAGGATCTTCACGGGTTGGAATGGAGGTTTCGACACATATACCGAGCAGGCCAGCCTAGAAGACATCTGCTCACAACCGGATGGAGTGCATTTGTAAATAAAAAAAAGCTGATCTCAGGGGATGCAGTACTATTCCTTAGGGGCGAGGATGGTGATTTGAGACTCGGAATAAGAAGGGCGGCACAGCTTAAAGGCGGGTCTGCCACTCCTGGTTTGTGCAGCCAGCAGCCTAGCCTTTGCAATTTTAGGAATGTGATTGATTCTATATTGACGAGAAGTGCATTCAGTGTTCATTGCAATCCGAGGACCTCGGCCGAGTTCATTATACCTCTTCCCAAATTCTTGAAGAGTGTAAACCAATCTTGGCCGATCGGAATGAGGTTTAAGATGCGTTTTGAAATGGAGGACGCAGCTGAACGAAGCAGACACACGGGCCAGATAGCTGCAATTAGCGATGTGGATCCAATTAGGTGGCCAGGTTCTAAGTGGAGATGTTTAGTGGTGAGGTGGGACGAAGCCGAAAAGAGTAGGCATGGTCGGGTTTCTCCGTGGGAGATTGAGCCGTCTGGTTCTCCTGGATCGAACGGCTTGGGTTTTCCGGGTTTGAAGAGGACTAGGATTAAGTTGTCTTCTGATAAACCAGACTTCCCAATCACTAGCACGATTGGGCAATCGGACTTTGAGGAATCTCTAAGATTCCCGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTTTTGATGCTTCATTCGATGGTTATGGAAATAAAAATCGACTACCATCCGCAAGAAGGGTGTTTTCATGCATGAATTCTGATGTTCCTTCTCAAAGTGTAGGCGGTAAGTCTTGCAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGCCTTCTGTACGGAAGAACGGCGTGGAGTCTTAACAACGCTCAAGAAAATGGCGAAGGCTGTGTAATCTTGGACGGGTTTCAAGTTCCTAAAGCTAAAAACGGTTGGCCTCTCTCAATGCATAGTTCAAATTCGCATGTCAAAATATCCTCGGCGACTGCCCAGGCATCCTCCCCATCTTCTATGTTAACATTTCAGCAGGCTATCAATGCAACTCCAACCTCCAGTTCAATCTACAGCAGTAGAAAAAGATGTCACTTTGCTGATGGATTAAGAAAAGAAATGCAGTCAAATGAGGATAATCAATTGGGTGGATCAAGTTTGAGCGGAAATCCGGTTCCGATGTGCAAAACTAATTGCAGACTATTCGGTTTTTCGCTGATTGAAGAAAATCAAGTTCCCCAGCTGGAGAAAGCTTTTCTGGTTTCACCTGCAACTCCGTACCTAGCCAACGTGGGAGGGCAGTGTCATCCAAAACCTCCATTGATGAACAAAGGGGTTGGAAACAAAGTAAGCAATGCATTAACTCTATAA 1980 46.62 MGGLIDLNTTEDDETPSFASSPDSSSSASGSTSPVPFCWELWHACVGPLISLPKKGSVVVYLPQAHLEIARDFPAGAYELPSHLFCRVLDVQLQAEAGTDEVSARISLVPESQNFEQKLQEGEINADNVGDDFEAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPQLDYNQQRPSQELSAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLISGDAVLFLRGEDGDLRLGIRRAAQLKGGSATPGLCSQQPSLCNFRNVIDSILTRSAFSVHCNPRTSAEFIIPLPKFLKSVNQSWPIGMRFKMRFEMEDAAERSRHTGQIAAISDVDPIRWPGSKWRCLVVRWDEAEKSRHGRVSPWEIEPSGSPGSNGLGFPGLKRTRIKLSSDKPDFPITSTIGQSDFEESLRFPKVLQGQEILGFDASFDGYGNKNRLPSARRVFSCMNSDVPSQSVGGKSCRFQKVLQGQEIFPSLLYGRTAWSLNNAQENGEGCVILDGFQVPKAKNGWPLSMHSSNSHVKISSATAQASSPSSMLTFQQAINATPTSSSIYSSRKRCHFADGLRKEMQSNEDNQLGGSSLSGNPVPMCKTNCRLFGFSLIEENQVPQLEKAFLVSPATPYLANVGGQCHPKPPLMNKGVGNKVSNALTL 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2751459 2754569 - Bpe000436.1 Bpe01g00451 97699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00451 659 ProSiteProfiles B3 DNA-binding domain profile. 145 248 IPR003340 GO:0003677
Bpe01g00451 659 Gene3D - 309 381 - -
Bpe01g00451 659 Gene3D - 143 248 IPR015300 -
Bpe01g00451 659 Pfam B3 DNA binding domain 145 247 IPR003340 GO:0003677
Bpe01g00451 659 PANTHER AUXIN RESPONSE FACTOR 3 28 654 - -
Bpe01g00451 659 Pfam Auxin response factor 275 353 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe01g00451 659 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 654 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe01g00451 659 CDD B3_DNA 143 246 IPR003340 GO:0003677
Bpe01g00451 659 MobiDBLite consensus disorder prediction 10 29 - -
Bpe01g00451 659 SMART B3_2 145 248 IPR003340 GO:0003677
Bpe01g00451 659 MobiDBLite consensus disorder prediction 1 29 - -
Bpe01g00451 659 SUPERFAMILY DNA-binding pseudobarrel domain 138 252 IPR015300 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00451 Bpe08g00399 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00451 Bpe-Chr1:2751459 Bpe08g00146 Bpe-Chr8:773862 5.43E-142 dispersed
Bpe14g01336 Bpe-Chr14:10608259 Bpe01g00451 Bpe-Chr1:2751459 8.46E-08 transposed
Bpe01g00451 Bpe-Chr1:2751459 Bpe08g00399 Bpe-Chr8:2446058 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20788 PF02362 B3 3.20E-20 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00451 K14486 - zju:107412017 732.25