Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00474 ATGGATTCTGCTAGAAGTTGGTTTCAGAAATTTCAACATAGAGACGATAGGGAAACTGAGAATGTGAAAGATGTTGATGAAGCCCCTTCCAGTGCAACAAAGCAGAAAGTTGAGGCTGCAAAGCAATATATTGAGAATCATTATAAATCTCAAATGAAGTCACTGCAAGATAGGAAAGAGAGGCGTTGGGTCATGGAAAGGAGGCTTGCCGATGCTGATGCTTCGGAGGAAGATCAAATGAACGTGTTGAAATATTTAGAGAGACAAGAGACAGAATATATGCGTTTGCGAAGGCATAAAATGGGCGTTGATGATTTTGAGCTTTTGACTATTATAGGAAGGGGTGCATTTGGGGAGGTGAGGCTTTGCAAGGAAAAAACCACAGGCCATGTATATGCCATGAAAAAACTTAAGAAATCTGAGATGCTTCGGCGAGGCCAGATTGTTCATTTTTATTTTCTTTTCCTTGTCTTTCTGAAGGTTGAACACGTGAAGGCTGAGAGAAATCTTTTAGCTGAGGTTGATAGTGCGTATATTGTCAAGCTTTACTGCTCTTTTCAAGATGATGAGTTTTTGTATCTTATTATGGAGTATCTTCCTGGAGGTGATGTGATGACATTACTGATGCGCAAGGACACTTTGACTGATGATGAGGCAAGGTTTTACGTTGGAGAGACAGTACTTGCCATCGAATCTATCCACATGCACAATTACATCCACAGGGACATAAAGCCTGACAATTTACTGCTTGATCGTTATGGTCATCTTAAACTTTCAGACTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCGAATCTTAGTGAGAATGACTACCAAATAGAAAGGAATCAGAAACCTATAGAAAGAAATGAGTTCTCTTCTAGCTTCCAGTCTGTACAAAGACGGACTCAGCAGGAACAGTTGTTGCATTGGCAAAAGAATAGACGAACATTGGCCTATTCAGCAGTTGGAACTCCTGATTACATTGCACCTGAGGTATTGTTGAGGAAAGGATATGGAATGGAGTGCGACTGGTGGTCTCTGGGAGCAATCATGTATGAGATGCTTGTGGGATATCCACCTTTTTATTCTGAAGATCCAATGTCAACATGCCGAAAGATAGTTAACTGGAGGGTGCATTTGAAATTCCCTGAAGAGGCCAAGCTGTCTGCTGAGGCGAAAGATCTAATTTGCAAACTTCTTTGCAACGTTGACCAAAGGCTTGGAACAAAAGGAGCTTTTGAAATCAAAGCACACCCGTGGTTTAAAGGACTAAAATGGGATCAACTGTATCAAATGGAAGCTGCTTTCATACCAGAGGTCAAAGATGAGTTAGATACTCAAAACTTTGAGAAGTTTGAAGAGGTCTCACCCGCTCAAACTCCCACAAGATCAGGTCCTTGGAGAAAGGCAAGTCCCAAAATTGTTCTTATTTTGCATTTAAGATCTTTTGTTTTATTGCAGATGCTTTCTCCGAAGGATTTGAATTTTGTCGGCTATACATACAAAAACTTCGAGATTGTTAATGAGCATCATTTGTCGGGCATTGCTGAGGTGAAGAAAAAGTCTTCTAAGCCAAAGAGACCATCCATCAATTCGTTATTTGATACACCTGATCCTTCAGATCAGTCTGTTCAGCAAAACTCTCTCAAATATTTACCAACCCACTTAGAAGGATCAGAAAGCCCTGAGCCGTCACCTCATTCAGTTAGACCAATGCAACACACGTCTAGGCGAAGATGA 1749 40.94 MDSARSWFQKFQHRDDRETENVKDVDEAPSSATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVMERRLADADASEEDQMNVLKYLERQETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCKEKTTGHVYAMKKLKKSEMLRRGQIVHFYFLFLVFLKVEHVKAERNLLAEVDSAYIVKLYCSFQDDEFLYLIMEYLPGGDVMTLLMRKDTLTDDEARFYVGETVLAIESIHMHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLESSSFPNLSENDYQIERNQKPIERNEFSSSFQSVQRRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRVHLKFPEEAKLSAEAKDLICKLLCNVDQRLGTKGAFEIKAHPWFKGLKWDQLYQMEAAFIPEVKDELDTQNFEKFEEVSPAQTPTRSGPWRKASPKIVLILHLRSFVLLQMLSPKDLNFVGYTYKNFEIVNEHHLSGIAEVKKKSSKPKRPSINSLFDTPDPSDQSVQQNSLKYLPTHLEGSESPEPSPHSVRPMQHTSRRR 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2926563 2937072 + Bpe000459.1 Bpe01g00474 97722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00474 582 ProSiteProfiles Protein kinase domain profile. 106 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00474 582 SUPERFAMILY Protein kinase-like (PK-like) 86 472 IPR011009 -
Bpe01g00474 582 Gene3D Phosphorylase Kinase; domain 1 104 202 - -
Bpe01g00474 582 CDD STKc_NDR_like 104 505 - -
Bpe01g00474 582 MobiDBLite consensus disorder prediction 7 31 - -
Bpe01g00474 582 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 546 - -
Bpe01g00474 582 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 546 - -
Bpe01g00474 582 SMART serkin_6 106 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00474 582 ProSiteProfiles AGC-kinase C-terminal domain profile. 425 514 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe01g00474 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Bpe01g00474 582 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bpe01g00474 582 SMART pkinase_C_6 425 506 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe01g00474 582 Gene3D Transferase(Phosphotransferase) domain 1 319 442 - -
Bpe01g00474 582 MobiDBLite consensus disorder prediction 1 36 - -
Bpe01g00474 582 Pfam Protein kinase domain 107 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00474 582 MobiDBLite consensus disorder prediction 530 557 - -
Bpe01g00474 582 Gene3D Transferase(Phosphotransferase) domain 1 203 269 - -
Bpe01g00474 582 Pfam Protein kinase C terminal domain 443 504 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bpe01g00474 582 Gene3D Phosphorylase Kinase; domain 1 443 453 - -
Bpe01g00474 582 MobiDBLite consensus disorder prediction 519 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00474 Bpe-Chr1:2926563 Bpe05g00857 Bpe-Chr5:21780310 0 dispersed
Bpe01g00474 Bpe-Chr1:2926563 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63117 PF00069 Pkinase 3.50E-61 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00474 K08790 - vvi:100244001 881.322