Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00498 ATGAGAGGGGAAGTGCAATTAGAGCCACCGAGTACGCAAATTGCAAGTGACTCTGATCCTCTACTTGAGAATCAGGAGGATTTATCGCCTGGTAGCTCAAGTGAGATTAAAGAGGATGACAATGAAGCTGGCGCCATTCCGTGTTGTCGCATCTGCCTTGAGAGCGATTTTGAACCAGATGATGACTTGATATCCCCATGCAAATGCAAAGGGACTCAGCAGTTTGTTCATCGCTCATGCCTTGATCACTGGCGTTCAGTTAAGGAAGGGTTTGCATTTTCGCATTGCACTACTTGCAAGGCCCAATTTCACCTACGAACTATTTCCTTTGAGGACAACTCATGGCGCAGAGTGAAGTTTAGACTTTTTGTGGCGAGGGATGTTCTCCTTGTTTTTCTTGCTGTACAAACTGTCATTGCAGCAATTGGAGGCTTTGCATATATTACGGACAGAGATGGGGCTTTTAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCCAAACATCCAATACCGTTCTATTATTGTATAGGAGTAATGGCCTTCTTTGTTATGCTTGGTTTTTTTGGGCTCATACTTCATTGCTCCTCCCTGAATAGCAATGATCCACGAGTAGCAGGATGCCATAATTGTTGGTATGGGTGGGGAATCTTGGATTGTTTTCCCGCATCTATGGAAGCCTGCTTTGCACTTGTTATTGTTTTTGTTGTCATATTTGCTATTCTTGGCATCGCATATGGTTTCCTTGCTGCGACTATGGCCATTCAGAGGATCTGGCAGAGACACTACCACATTCTCACCAAAAGGGAGCTAACTAAGGAGTACATAGTGGAGGATCTTCATGGTTGCTATACACCCCCAAAATTGGATCCAGGACACGAAGAACGTCTGAAAATGCTCAAGCTTTTA 912 44.19 MRGEVQLEPPSTQIASDSDPLLENQEDLSPGSSSEIKEDDNEAGAIPCCRICLESDFEPDDDLISPCKCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRTISFEDNSWRRVKFRLFVARDVLLVFLAVQTVIAAIGGFAYITDRDGAFRNSFSDGWDRILSKHPIPFYYCIGVMAFFVMLGFFGLILHCSSLNSNDPRVAGCHNCWYGWGILDCFPASMEACFALVIVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGCYTPPKLDPGHEERLKMLKLL 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3182327 3184493 - Bpe024500 Bpe01g00498 97746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00498 304 MobiDBLite consensus disorder prediction 1 40 - -
Bpe01g00498 304 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 304 - -
Bpe01g00498 304 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 304 - -
Bpe01g00498 304 ProSiteProfiles Zinc finger RING-CH-type profile. 41 106 IPR011016 GO:0008270
Bpe01g00498 304 CDD RING_CH-C4HC3_MARCH 49 100 - -
Bpe01g00498 304 Pfam RING-variant domain 49 99 IPR011016 GO:0008270
Bpe01g00498 304 MobiDBLite consensus disorder prediction 9 31 - -
Bpe01g00498 304 SUPERFAMILY RING/U-box 47 104 - -
Bpe01g00498 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 112 IPR013083 -
Bpe01g00498 304 SMART ringv_2 48 100 IPR011016 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00498 Bpe-Chr1:3182327 Bpe06g00062 Bpe-Chr6:729570 2.58E-59 dispersed
Bpe01g00498 Bpe-Chr1:3182327 Bpe11g00167 Bpe-Chr11:1157288 2.75E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00498 - - zju:107432369 560.836