Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00498 | ATGAGAGGGGAAGTGCAATTAGAGCCACCGAGTACGCAAATTGCAAGTGACTCTGATCCTCTACTTGAGAATCAGGAGGATTTATCGCCTGGTAGCTCAAGTGAGATTAAAGAGGATGACAATGAAGCTGGCGCCATTCCGTGTTGTCGCATCTGCCTTGAGAGCGATTTTGAACCAGATGATGACTTGATATCCCCATGCAAATGCAAAGGGACTCAGCAGTTTGTTCATCGCTCATGCCTTGATCACTGGCGTTCAGTTAAGGAAGGGTTTGCATTTTCGCATTGCACTACTTGCAAGGCCCAATTTCACCTACGAACTATTTCCTTTGAGGACAACTCATGGCGCAGAGTGAAGTTTAGACTTTTTGTGGCGAGGGATGTTCTCCTTGTTTTTCTTGCTGTACAAACTGTCATTGCAGCAATTGGAGGCTTTGCATATATTACGGACAGAGATGGGGCTTTTAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCCAAACATCCAATACCGTTCTATTATTGTATAGGAGTAATGGCCTTCTTTGTTATGCTTGGTTTTTTTGGGCTCATACTTCATTGCTCCTCCCTGAATAGCAATGATCCACGAGTAGCAGGATGCCATAATTGTTGGTATGGGTGGGGAATCTTGGATTGTTTTCCCGCATCTATGGAAGCCTGCTTTGCACTTGTTATTGTTTTTGTTGTCATATTTGCTATTCTTGGCATCGCATATGGTTTCCTTGCTGCGACTATGGCCATTCAGAGGATCTGGCAGAGACACTACCACATTCTCACCAAAAGGGAGCTAACTAAGGAGTACATAGTGGAGGATCTTCATGGTTGCTATACACCCCCAAAATTGGATCCAGGACACGAAGAACGTCTGAAAATGCTCAAGCTTTTA | 912 | 44.19 | MRGEVQLEPPSTQIASDSDPLLENQEDLSPGSSSEIKEDDNEAGAIPCCRICLESDFEPDDDLISPCKCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRTISFEDNSWRRVKFRLFVARDVLLVFLAVQTVIAAIGGFAYITDRDGAFRNSFSDGWDRILSKHPIPFYYCIGVMAFFVMLGFFGLILHCSSLNSNDPRVAGCHNCWYGWGILDCFPASMEACFALVIVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGCYTPPKLDPGHEERLKMLKLL | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3182327 | 3184493 | - | Bpe024500 | Bpe01g00498 | 97746 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00498 | 304 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Bpe01g00498 | 304 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 1 | 304 | - | - | |
Bpe01g00498 | 304 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 1 | 304 | - | - | |
Bpe01g00498 | 304 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 41 | 106 | IPR011016 | GO:0008270 | |
Bpe01g00498 | 304 | CDD | RING_CH-C4HC3_MARCH | 49 | 100 | - | - | |
Bpe01g00498 | 304 | Pfam | RING-variant domain | 49 | 99 | IPR011016 | GO:0008270 | |
Bpe01g00498 | 304 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - | |
Bpe01g00498 | 304 | SUPERFAMILY | RING/U-box | 47 | 104 | - | - | |
Bpe01g00498 | 304 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 32 | 112 | IPR013083 | - | |
Bpe01g00498 | 304 | SMART | ringv_2 | 48 | 100 | IPR011016 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00498 | Bpe-Chr1:3182327 | Bpe06g00062 | Bpe-Chr6:729570 | 2.58E-59 | dispersed | |
Bpe01g00498 | Bpe-Chr1:3182327 | Bpe11g00167 | Bpe-Chr11:1157288 | 2.75E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00498 | - | - | zju:107432369 | 560.836 |