Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00521 ATGAAGAAGACGACCCACTTCAACTTCACCTTCACCTTCACTCTCTCATTTTCCTTCGTTTTCGTTCTTGCTTCTCTAGTGAGCCTCAGCAATGGAGAAAGCTTCGCAGTTTCTAGACATGGCAGGCTTACTGACGCTGAAGCTTTGTACATTAGAAAGCGTCAGCTCCTTTACTACAGAGACGAGTTCGGCGATAGAGGTGAGAAAGTGACCGTGGATTCTTCTCTTGTTTTTGAAAACGAAAGGCTCAGAAATGCTTATATTGCTTTACAAGCATGGAAGCAAGCTATTTTATCTGACCCTTTAAATCTCACCGGAAATTGGGTTGGATCTGGCGTCTGTGACTACAAGTGGGTTTTCTGTGCTCCAGCGCCGGACAATCCTAAGATCCGAACCGTGGCCGGCATCGATCTAAACCACGGCGACATTGCGGGGTACTTACCGGAAGAGCTCGGTCTACTTGTAGATCTTGCATTGTTCCACATTAACTCTAACCGGTTTTGTGGCACTGTTCCTCATAAGTTCGAACGTCTGAAACTGCTCTACGAGCTGGATCTCAGTAACAATAGGTTCGCTGGGAAGTTTCCCGCGGTGGTTCTTTCGCTTCCGTCGCTTAAATTCTTGGATCTGAGGTTTAATGAGTTTGAAGGTACGATTCCCAGTGAGCTGTTCGATAAAGATTTAGATGCTATATTTATAAATCACAACCGATTTAGATTCGAGCTGCCTGAAAATTTCGGAAATTCTCCGGTCTCGGTTATCGTTCTCGCTGGCAATAAATTTCATGGCTGTATTCCTTCGAGCTTGGGTAATATGTCAAGGCTAAATGAGATTATTATGTTGAATAATGAGCTACGATCGTGTTTACCTCCGGAGATTGGGTTGCTGAAGAATTTGACGGTGTTTGATGTGAGCTTCAACCAGCTGCTCGGTTCGTTGCCGGAGGAAATCGGAGGGATGGTGAGTTTGGAGCAGCTTAATGTGGCTCATAATCTTTTCTCTGGCAAAATACCGGCGAGTATTTGTAAGCTTCCAAATCTGCAGAATTTCACTTTCTCTTATAACTTCTTCACCGGTGAACCTCCGGCTTGCTTGGGGCTTTCGAAGTTTGATGACCGGAGAAACTGCTTGCCGCAACGGCCACTGCAGAGGTCAGGTAAGCAATGTAAGTCGTTTTTGTCTAAGCCAGTGGACTGTGGTTCGTTTAGATGTAAACCTTTCGTTCCTACTTTGCCACCGCCACCTCCTCCGTCTCCTCCCGTCTTCCCCCCGCCGCCAGTTGTGATTCACTCACCTCCCCCTTCGCCTCTATATTCACCCCAATCTCCTCCACCGCCTCCACCTTCACCATCTCCCCCTCCGCCACTGCCATCTCCATCTCCACCAATTTACTCTTTACCACCGCCTCCAGTTTACTCTCCTCCCCCTCCACTTCCTCCAGTTTACTCTCCTACCCCTCCACCACCTCCAGTTTACTCTCCGCTTCCACCTTCTCCAGTTTACTCTCCTCCTCCACCCCCGCCGACTCCTCCACCTCCAATTTACTCTCCTCCTCCGCCCCCACCTTCTCCACCACCTCCANNACCATCTCCCCCTCCACCGCACATAGTTCATCACTCTCCTCCACCTCCTCCGCACATAGTTCATCACTCTCCTCCACCTCCTCCAATTGCCTGTGAAACTCCACCTTCTCCACCATCATCGCCCGTCCCTGCGTATGAAAGATCTCCACCTCCGGCCCCATCATATGAAGGGCCATTACCACCCATACACGGAGTTTCATACGCATCCCCTCCGCCCCCACCCTTCTATTGA 1815 49.31 MKKTTHFNFTFTFTLSFSFVFVLASLVSLSNGESFAVSRHGRLTDAEALYIRKRQLLYYRDEFGDRGEKVTVDSSLVFENERLRNAYIALQAWKQAILSDPLNLTGNWVGSGVCDYKWVFCAPAPDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFERLKLLYELDLSNNRFAGKFPAVVLSLPSLKFLDLRFNEFEGTIPSELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLAGNKFHGCIPSSLGNMSRLNEIIMLNNELRSCLPPEIGLLKNLTVFDVSFNQLLGSLPEEIGGMVSLEQLNVAHNLFSGKIPASICKLPNLQNFTFSYNFFTGEPPACLGLSKFDDRRNCLPQRPLQRSGKQCKSFLSKPVDCGSFRCKPFVPTLPPPPPPSPPVFPPPPVVIHSPPPSPLYSPQSPPPPPPSPSPPPPLPSPSPPIYSLPPPPVYSPPPPLPPVYSPTPPPPPVYSPLPPSPVYSPPPPPPTPPPPIYSPPPPPPSPPPPXPSPPPPHIVHHSPPPPPHIVHHSPPPPPIACETPPSPPSSPVPAYERSPPPAPSYEGPLPPIHGVSYASPPPPPFY 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3372460 3374287 - Bpe000504.2 Bpe01g00521 97769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00521 604 Gene3D Ribonuclease Inhibitor 87 248 IPR032675 -
Bpe01g00521 604 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 20 510 - -
Bpe01g00521 604 MobiDBLite consensus disorder prediction 432 604 - -
Bpe01g00521 604 Gene3D Ribonuclease Inhibitor 249 380 IPR032675 -
Bpe01g00521 604 PRINTS Proline rich extensin signature 450 471 - -
Bpe01g00521 604 PRINTS Proline rich extensin signature 412 428 - -
Bpe01g00521 604 PRINTS Proline rich extensin signature 433 445 - -
Bpe01g00521 604 SMART LRR_typ_2 296 320 IPR003591 -
Bpe01g00521 604 SMART LRR_typ_2 202 226 IPR003591 -
Bpe01g00521 604 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 510 - -
Bpe01g00521 604 SUPERFAMILY L domain-like 87 367 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00521 Bpe08g00463 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00521 Bpe-Chr1:3372460 Bpe04g00037 Bpe-Chr4:371105 2.00E-173 dispersed
Bpe08g00506 Bpe-Chr8:3354068 Bpe01g00521 Bpe-Chr1:3372460 4.92E-98 transposed
Bpe08g00595 Bpe-Chr8:4306895 Bpe01g00521 Bpe-Chr1:3372460 1.12E-09 transposed
Bpe01g00521 Bpe-Chr1:3372460 Bpe08g00463 Bpe-Chr8:2974154 6.81E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00521 - - tcc:18588631 648.662