Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00533 ATGTCAACTCCTACTCCGGCGCCGGATACCAATGCAACGGTGACTCCCCCGTCGACTGTGAGTCCTCCACCATCAGCTACTCCCTCTTCCCCTCCGCCACCTGCTGACTCTGTGCCACCTCCCGTCGCTAATTCTCCGCCTCCTCCTGCTTCTGCCCCGCCTCCAGAAACTCCATCGCCACCTCCACCAACTGCTCCTGCTTCTACGCCTCCTACGCCTGCTCCGCCTCCTCCCTCAACGTCTTCGTCATCTCCACCTCCGCCATCAACATCTTCTCCACCCCCTTCCTCTGATTCTCCCCCTCCGCCGGTAGCCTCTTCACCACCACCTACTACCGGGTCTCCACCTCCGCCGTCAGACTCTTCACCGCCGACTTCTTCTGCCTCTCCGCCTCCTCCGTCAAGATCTTCACCGCCGGCTACTTCAGCCTCTCCCCCTCCGCCTTCAACCCCCTCTCCGCCGACTTCCTCGGCCTCTCCACCTCCTCCGCGATCATCATCCTCCCCTCCTCCTCCTCCTCCTTCTACCAACTCGACTACTCCGTCGCTTCTGAGCCCTCCTCCTCCTTTGAGTTCGGGTTCGACACCGGTCAGGAGTCCGCCACCGCCACCGCCACCGCCTTCGTCAACCTCAACTTCTTCGTCATCTGGAATTTCTGCAGGGGTTGTAGTTGGAATAGCCATAGGCGGGCTCGCAATTCTTTTGGTTTTAATTATATTCTTCGTATGCTTCAGAAAGAAAAGGCGGCACCATGATGATGAGGCTTTCCATGCGCAGCCTCCATTGGCAGGGTATAAAGATGACCCATATGGTGGCCCGCCAAACCACTGGCGCCAAAACGCTCCGCAGCCTCCTGGCCCGATTGTGGGATTAATGGCCAAACCATCTCCTCCTCCGGCAGTGAATGCTTATACGCCACCCTTTTTACAGCCCTACATCAGTAGTAGTGGAGGTTCTGGCTCTAATTATTCTGGGCCTGAAACACCGCTCCCTCCTCCACCGCCCGGCTCTGTATTAGGATTCTCTAAGAGCACTTTTACTTATGAGGAATTAGCATTGGCCACAGATGGTTTCTCAGAAGCTAACCTCCTCGGACAAGGTGGTTTTGGGTATGTGCACAGAGGAGTTCTTCCTAATGGGAAAGAAGTGGCAGTCAAGCAGCTTAAAGCTGGAAGCGGCCAAGGGGAGCGTGAATTTCAAGCAGAAGTTGAAATTATTAGCCGAGTGCACCATAGACATCTCGTTTCACTCGTTGGATATTGCATCACTGGGTCTCAGAGATTGCTGGTTTATGATTATATTCCCAACAATACATTGGAGTTCCACTTACACGGCAATCCTAAAATTATCCATCGTGACATAAAAGCGGCCAATATTCTACTAGATTTTAAATTTGAGGCGAAGGTGGCTGATTTTGGACTTGCAAAGTTTACTTCTGACATTAATACACATGTATCTACCCGAGTGATGGGAACTTTTGGATATCTTGCTCCAGAATATGCTTCGAGTGGCAAACTATCTGAAAAATCCGATGTTTTCTCCTTCGGAGTCATGCTTTTGGAGTTGATTACTGGGCATAGACCTGTGGATACTACTCAGACTTTCATGGAGGATAGTTTAGTAGACTGGGCTAGACCTTTACTTATGAGAGCTGTTGAAGATGAGAACTTTGATGGTCTGATAGACCCAAAGCTGCAAGGTAATTTCAGCCCCACAGAGATGGCTCGAATGGTTGCTTGTGCGGCTGCTTGTGTGCGTCATTCCGCAAAGCGTCGACCAAGGATGAGTCAGCAGGTGGTTCGAGCACTAGAAGGGGACGCAACTATAGCCGATCTCAACGAAGGAGTGAGACCAGGACATAGCACTGTTTATGGGGAAAGCTCTGACTATGACTCGAGCCAATACAAGGAGGACATGAAGAAGTTCAGGAAAATGGCATTGGGAAGCCAGGAGTACGGTGCCAGCGGCGAGTACAGTGGCGGAACCAGCGACTACGGTCTGTACCCATCCGGGTCGAGCAGTGAGGGCCAAACAACTAGAGAAATGGAGTTGAGAAGGTTGAGGAATGGAAGTCAAGGATTTAGCTGA 2088 51.96 MSTPTPAPDTNATVTPPSTVSPPPSATPSSPPPPADSVPPPVANSPPPPASAPPPETPSPPPPTAPASTPPTPAPPPPSTSSSSPPPPSTSSPPPSSDSPPPPVASSPPPTTGSPPPPSDSSPPTSSASPPPPSRSSPPATSASPPPPSTPSPPTSSASPPPPRSSSSPPPPPPSTNSTTPSLLSPPPPLSSGSTPVRSPPPPPPPPSSTSTSSSSGISAGVVVGIAIGGLAILLVLIIFFVCFRKKRRHHDDEAFHAQPPLAGYKDDPYGGPPNHWRQNAPQPPGPIVGLMAKPSPPPAVNAYTPPFLQPYISSSGGSGSNYSGPETPLPPPPPGSVLGFSKSTFTYEELALATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYDYIPNNTLEFHLHGNPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDINTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGHRPVDTTQTFMEDSLVDWARPLLMRAVEDENFDGLIDPKLQGNFSPTEMARMVACAAACVRHSAKRRPRMSQQVVRALEGDATIADLNEGVRPGHSTVYGESSDYDSSQYKEDMKKFRKMALGSQEYGASGEYSGGTSDYGLYPSGSSSEGQTTREMELRRLRNGSQGFS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3452199 3455793 + Bpe000514.1 Bpe01g00533 97781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00533 695 Gene3D Transferase(Phosphotransferase) domain 1 440 615 - -
Bpe01g00533 695 MobiDBLite consensus disorder prediction 652 695 - -
Bpe01g00533 695 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 446 683 - -
Bpe01g00533 695 SMART serkin_6 358 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00533 695 MobiDBLite consensus disorder prediction 1 216 - -
Bpe01g00533 695 CDD TM_EGFR-like 223 251 - -
Bpe01g00533 695 Pfam Protein kinase domain 442 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00533 695 MobiDBLite consensus disorder prediction 17 210 - -
Bpe01g00533 695 MobiDBLite consensus disorder prediction 1 16 - -
Bpe01g00533 695 Gene3D Phosphorylase Kinase; domain 1 336 433 - -
Bpe01g00533 695 SUPERFAMILY Protein kinase-like (PK-like) 333 597 IPR011009 -
Bpe01g00533 695 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 446 683 - -
Bpe01g00533 695 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 110 445 - -
Bpe01g00533 695 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 110 445 - -
Bpe01g00533 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Bpe01g00533 695 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Bpe01g00533 695 ProSiteProfiles Protein kinase domain profile. 358 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00533 Bpe-Chr1:3452199 Bpe05g00345 Bpe-Chr5:17406581 2.17E-172 dispersed
Bpe01g00533 Bpe-Chr1:3452199 Bpe13g01312 Bpe-Chr13:18259946 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63118 PF00069 Pkinase 6.60E-23 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00533 - - jre:108980419 688.337