Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00538 ATGGACCCGATACAGCCAAAGAGCTGGAGCATCCATACCCGGTTGGAGATCACCCAAAAGTACCAAATTCTCGAAAGGGTCGGATCCGGGGCTTTCTCCGACGTCTATCGTGGCCGCCGTCACTCCGATGGTCTCATCGTTGCCCTGAAAGAGATACACGATTACCAGTCTGCTTTCAGGGAAATCGAGGCCCTCCAAATCCTAAAGTCTTCTCCTCATGTCGTCCTTCTGCACGAATACTTTTGGCGCGAGGATGAAGACGCCGTCCTCGTCCTCGAGTTCCTGAGAACAGATTTGTCAGGCGTAATCAGCGAGGCTAAGAAGGGAGGCTCCGTCGGGATGGGAGAGGTGAAGAGGTGGATGCTCCAGATACTGGCCGGGGTTGACGATTGCCATCGGAATCTGATCGTCCATCGGGATTTGAAACCTAGCAATTTGTTGATCTCTGACGATGGAGTGCTCAAAATTGCTGATTTTGGACAGGCAAGAATACTCATGGAAACTGGAAATATCAACACCCACGAGACCCGACATCCATATGAGCAAGAGCAACACTCTCCTAACCCTGCATTCGCCATTCAAACATCCGAAGCATTAGCTGAATCAGATTCCACTTCTCAAGATAAATATCAAACCAACGAGCAGGAAATCATCAGCAAGGAAGAATATTTCAGAGCATTAGATGAGCTAAAGGGGAAAAACTCGAGGGATGATATCGATAAGGAAGCAAATATTCAGGATGGAAATACATCTTGCTTTGCGACATGCACAGCCAGTGACATAGAAGATGATCCTTTCAAGGGTTCTTATTCTTATGAGGTTGAAGGAGATGAATCAAATGGATTGCTTACTTCCTGTGTCGGAACCCGTTGGTTCAGAGCCCCTGAGCTGCTCTATGGATCCACAAACTACGGCCTGGAGATCGACTTGTGGTCATTGGGCTGCATTTTTGCAGAGCTTTTCACTCTTCAGCCTCTTTTTCCAGGAACAACCGATATCGATCAGCTAAGTCGAATACTCGGTGTTTTAGGAAATATAACTGAGGAAAACTGGCCTGGCTGTTTGAAACTTCCTGATTATACAATTATATCATTCAATAAAGTGGAAGATCCAATTGGTTTAGAAAGATGTATGCCCAACTGTTCTTCCGATGAAACATCGCTGGTGAGAAGACTTATTTGTTACGACCCAGCTCGTAGAACTTGTGCGGTAGAGTTACTTCATGACAAGTATTTTACCGACAAGCCTCTTCCGGTTCCGATGTCTGAGCTGAGAGTTCCCCTGGCCAGAAATATGCAAGATGATGATTCTTCTGGTGGGTTGCCAGATTATGATGAACCTTTTTCAGATTCCGATTTTGAGGACTTCGCCCCCATGAATGTCACCACCACCGGTACTGGTTTTTCCATACGCTTTCCTTGA 1422 46.41 MDPIQPKSWSIHTRLEITQKYQILERVGSGAFSDVYRGRRHSDGLIVALKEIHDYQSAFREIEALQILKSSPHVVLLHEYFWREDEDAVLVLEFLRTDLSGVISEAKKGGSVGMGEVKRWMLQILAGVDDCHRNLIVHRDLKPSNLLISDDGVLKIADFGQARILMETGNINTHETRHPYEQEQHSPNPAFAIQTSEALAESDSTSQDKYQTNEQEIISKEEYFRALDELKGKNSRDDIDKEANIQDGNTSCFATCTASDIEDDPFKGSYSYEVEGDESNGLLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLQPLFPGTTDIDQLSRILGVLGNITEENWPGCLKLPDYTIISFNKVEDPIGLERCMPNCSSDETSLVRRLICYDPARRTCAVELLHDKYFTDKPLPVPMSELRVPLARNMQDDDSSGGLPDYDEPFSDSDFEDFAPMNVTTTGTGFSIRFP 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3494349 3496136 - Bpe000519.1 Bpe01g00538 97786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00538 473 Pfam Protein kinase domain 279 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00538 473 Pfam Protein kinase domain 21 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00538 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bpe01g00538 473 SMART serkin_6 21 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00538 473 PANTHER CELL DIVISION PROTEIN KINASE 16 421 - -
Bpe01g00538 473 SUPERFAMILY Protein kinase-like (PK-like) 9 434 IPR011009 -
Bpe01g00538 473 Gene3D Transferase(Phosphotransferase) domain 1 10 210 - -
Bpe01g00538 473 ProSiteProfiles Protein kinase domain profile. 21 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00538 473 PANTHER CYCLIN-DEPENDENT KINASE 10 16 421 - -
Bpe01g00538 473 Gene3D Transferase(Phosphotransferase) domain 1 252 423 - -
Bpe01g00538 473 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00538 Bpe-Chr1:3494349 Bpe04g01919 Bpe-Chr4:24144143 1.69E-15 dispersed
Bpe01g00538 Bpe-Chr1:3494349 Bpe11g00362 Bpe-Chr11:2728497 2.24E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63119 PF00069 Pkinase 4.20E-33 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00538 - - zju:107431795 664.84