Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00548 ATGGGTTGCGTCTATTCAAGGATTTGTATTGGTGAGATATCTACCCCAAAAACTTCTAGACTTGCAGAGACTCAAAATGCGGGAATTGCTGCTGGAGTTGGAGTCTTCTCTCCCGCCTCTTCCAACGGCCAAGATGGAGAAGTGGTGGATCAGTTGAATCGGTTTAACACCAACAGAGATTCGGAGGCCGGTATTAGAAGACTCTCTAGGGTTTCATCGCAGTTTTTACCACCGGAAGGATCAAGAACTGTAAAAGTTCCACTTGGCAACTACGAACTACGCTATTCGTTTCTGTCGCAGAGAGGCTATTATCCGGATGCTCTTGATAAGGCCAACCAAGACAGCTTTTGTATCCACACTCCATTTGGAACTAGCCCAGATGACCATTTCTTCGGGGTTTTCGATGGCCATGGAGAATTTGGAGCTCAATGCTCTCAGTACGTTAAGAGAAAAGTTTGTGAAAATTTGCTCAGAAATGCTAAATTCCAAAAAGACGCTGTTGAGGCTTGCCATGCGGCTTTTCTGGCAACAAATTCACAGCTTCACGCCGATATATTAGATGACAGCATGAGTGGGACTACTGCTGTGACAATTCTGGTTCGAGGCAGGACCATCTATGTATCTAATTCAGGTGACTCGAGGGCGGTTCTTGCAGAGAAGAGAGGGAAGGATCTTGTAGCGGTCGACCTTTCAATCGATCACACTCCATTTAGGACAGATGAGCTCGAACGAGTTAAGCTTTGCGGGGCCAGAGTTCTCACATTGGATCAAATCGAGGGTCTAAAAGATCCAGATGTGCAATGTTGGGGAGCGGAAGAAGGCGATGAAGGTGATCCTCCGAGGCTCTGGGTCCCAAATGGGATGTATCCTGGGACGGCTTTTACGAGAAGCATAGGTGATTCACTTGCTGAGACAATTGGGGTTGTTGCTACTCCTGAAATTGTTGTTTTTGAGCTTACATCAAATAATCCTTTCTTCGTACTGGCTAGTGATGGGGTGTTTGAGTTTCTTTCGAGTCAAACAGTTATCGACATGGTTGCAAAATACAAAGATCCTCGTGATGCTTGTGCTGCAATCGTAGCTGAGTCTTATAGACTTTGGCTACAGTACGAAACTCGGACAGATGATATTACAGTGATCGTTGTGCATATCAATGGCCTAACTAATCTTGTATTTTGTCAGTCTGGTGAATCAGAAAAAATTGGTGGTTTGATACGCTCACCAATCCCTCAAGTAGTTGAGGTTACAGGTTCAGAATCTCCCTCAATGTTTGGTTGGAATTCGAGGATCCATCGTGTGAGGCAAGATTTGTCAAAGGCTCGCCTTCGTGCTATTGAAACTTCTCTAGAGCATGGTCAGTTATGGGTTCCTCCATCCCCAGCCCATAGGAAGACATGGGAAGAAGAAGCTCAAATTGAGCGGTCACTGCATGACCATTTCCTTTTCCGAAAATTAACCAATTCTCAGCGGCACGTTTTACTAGATTGCATGCAAAGGGTAGAGATCCATCCTGGAGAAATTGTAGTTAAACAGGGTAGTGAAGGTGATTGTTTTTACGTCGTTGGAAGTGGAGAATTTGAGGTCTTGGCAACCCAGCGAGAGAATGATGGAGAGTTTTCTCGAGTTCTGCAGCACTACACAGCTGAAAAGTTATCGTCTTTTGGAGAACTAGCACTAATGTCTAACAAACCACTCCAAGCATCTGTTCGAGCCGTAACTAGTGGAACATTATGGGCCTTGAAAAGAGAAGATTTTAGGGGAATTCTCATGTCAGAGTTTACTAATTTGTCATCATTGAAGCTCCTTCGATCAGTTGATCTTTTATCGAGGTTGACAATCTTGCAGCTGAGTAACATTTCTGATAGTCTTTCTGAAGTTGCCTTTTCGAATGGGCAGGTGATAGTTGATAAGAGCAAAGACCTACTTGCATTGCACATCATCCAAAAGGGAGAAGTTAGGATCACTTTTGATGCTGACTTAGTGACCAGTGTGAACATTCACAGCCTAAAATCCGGCAATTATGAAGAAGATGAAAACCCACAAAGCAGCAGAGAAATCTCGTTGGTCAAGAAAGAAGGAAGTTATTTTGGTGAATGGGCTCTTCTTGGTGAGCGTATTGAATCCTTTAGTGCTGTTGCTGTGGGTAATGTTGTATGTGCTGTCTTAACAAAGGAACAATTCGAGTCTGCTGTTGGCCCTTTTCCAAAGCTTCCTCCAGATGATCAGAAGATGACAGAATATTCTTCAAACGTTCTCAAGGAACCTACAAAAAGTATCGATATTTCAGCTCTCAATGATGTTGAGCTCTCTGATCTGGAGTGGAGAACATGCTTATACGCCAACGATTGCAGTGAGATTGGTATCGTATTGTTAAGAAATCCAGAGCTTCTGCTCAGTTTGAAGAGATTTTCAAAGCATAAAGTGAAAAAGCTTGGGAAGGAAGAACAAGTGTTAAAGGAGAAGAATCTTTTGATGAGTTTGAGCCAAGCAACTTGTGTTCCGCAGATCCTTTGCACTCGTGTAGATCAAACACATGCTGGGATATTGCTGAATAGATGCTTTGCTTGTCCTTTGTCTTCTATACTTCACAGCCGGTTAGATGAGTCTTCTGCTCGATTTTTTGCTGCTTCTCTTGTCATTGCCTTAGATGATTTGCACCAGCATGGTGTACTCTACAGAGGAATTTCTCCTGATGTTATAATGCTTGACCAAACAGGGCATATACAGCTAGTGGACTTCAGATTTGGAAAGAAGATATGCGGTGAGAGGACATTCACTGCTTGTGGAATGACAGACTTCTTAGCTCCAGAGATAGTCCAAGGAAAAGGCCATGGTTTTGCTGCTGACTGGTGGGCACTCGGAGTCTTGATCTATTACATGTTAAAAGGTGAAAAGCCATTTGGATCATGGAGAGAGAGTGAACTCGATACATTTGCCAAAATCGCAAAAGGAAAATTAAAGCTTCCTCAGATTTTCAACCCCAAAGTCATTGATCTCATATCCAAGTTACTTGAAGTTGATGAAAGCTCGAGGCTTGGAACTGAAGGTTCAAATTCAGTCAAAAGTCATCCATGGTTTGACGATGTAGATTGGGACAGGATTAAAGAATGTAGCTTTCCTGTTCCTGATTCTATCCTCTCCCGTCTAACTCAACACCTCGACAATCCGATTCCCTTACTTAACCAACCTCACGACCCGGAAATTGATGTTCCTGATTGGATCGAAGGGTGGTAG 3234 43.38 MGCVYSRICIGEISTPKTSRLAETQNAGIAAGVGVFSPASSNGQDGEVVDQLNRFNTNRDSEAGIRRLSRVSSQFLPPEGSRTVKVPLGNYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQYVKRKVCENLLRNAKFQKDAVEACHAAFLATNSQLHADILDDSMSGTTAVTILVRGRTIYVSNSGDSRAVLAEKRGKDLVAVDLSIDHTPFRTDELERVKLCGARVLTLDQIEGLKDPDVQCWGAEEGDEGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVVATPEIVVFELTSNNPFFVLASDGVFEFLSSQTVIDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTNLVFCQSGESEKIGGLIRSPIPQVVEVTGSESPSMFGWNSRIHRVRQDLSKARLRAIETSLEHGQLWVPPSPAHRKTWEEEAQIERSLHDHFLFRKLTNSQRHVLLDCMQRVEIHPGEIVVKQGSEGDCFYVVGSGEFEVLATQRENDGEFSRVLQHYTAEKLSSFGELALMSNKPLQASVRAVTSGTLWALKREDFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSNISDSLSEVAFSNGQVIVDKSKDLLALHIIQKGEVRITFDADLVTSVNIHSLKSGNYEEDENPQSSREISLVKKEGSYFGEWALLGERIESFSAVAVGNVVCAVLTKEQFESAVGPFPKLPPDDQKMTEYSSNVLKEPTKSIDISALNDVELSDLEWRTCLYANDCSEIGIVLLRNPELLLSLKRFSKHKVKKLGKEEQVLKEKNLLMSLSQATCVPQILCTRVDQTHAGILLNRCFACPLSSILHSRLDESSARFFAASLVIALDDLHQHGVLYRGISPDVIMLDQTGHIQLVDFRFGKKICGERTFTACGMTDFLAPEIVQGKGHGFAADWWALGVLIYYMLKGEKPFGSWRESELDTFAKIAKGKLKLPQIFNPKVIDLISKLLEVDESSRLGTEGSNSVKSHPWFDDVDWDRIKECSFPVPDSILSRLTQHLDNPIPLLNQPHDPEIDVPDWIEGW 1077
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3552891 3559087 + Bpe000529.1 Bpe01g00548 97796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00548 1077 Pfam Cyclic nucleotide-binding domain 500 591 IPR000595 -
Bpe01g00548 1077 Pfam Cyclic nucleotide-binding domain 626 730 IPR000595 -
Bpe01g00548 1077 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Bpe01g00548 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 481 590 IPR000595 -
Bpe01g00548 1077 Gene3D Jelly Rolls 457 595 IPR014710 -
Bpe01g00548 1077 Pfam Protein kinase domain 798 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00548 1077 Gene3D Phosphorylase Kinase; domain 1 784 856 - -
Bpe01g00548 1077 Gene3D Transferase(Phosphotransferase) domain 1 857 1039 - -
Bpe01g00548 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 607 733 IPR000595 -
Bpe01g00548 1077 ProSiteProfiles PPM-type phosphatase domain profile. 94 384 IPR001932 -
Bpe01g00548 1077 Gene3D - 89 385 IPR036457 -
Bpe01g00548 1077 SUPERFAMILY PP2C-like 81 386 IPR036457 -
Bpe01g00548 1077 SMART PP2C_4 90 382 IPR001932 -
Bpe01g00548 1077 SUPERFAMILY cAMP-binding domain-like 461 591 IPR018490 -
Bpe01g00548 1077 SMART cnmp_10 607 749 IPR000595 -
Bpe01g00548 1077 SMART cnmp_10 481 604 IPR000595 -
Bpe01g00548 1077 SMART serkin_6 784 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00548 1077 CDD CAP_ED 607 737 IPR000595 -
Bpe01g00548 1077 SUPERFAMILY Protein kinase-like (PK-like) 792 1057 IPR011009 -
Bpe01g00548 1077 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 37 1055 - -
Bpe01g00548 1077 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 37 1055 - -
Bpe01g00548 1077 CDD PP2Cc 110 384 IPR001932 -
Bpe01g00548 1077 PRINTS cAMP-dependent protein kinase signature 517 531 - -
Bpe01g00548 1077 PRINTS cAMP-dependent protein kinase signature 502 516 - -
Bpe01g00548 1077 PRINTS cAMP-dependent protein kinase signature 552 561 - -
Bpe01g00548 1077 SUPERFAMILY cAMP-binding domain-like 599 736 IPR018490 -
Bpe01g00548 1077 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Bpe01g00548 1077 Gene3D Jelly Rolls 596 754 IPR014710 -
Bpe01g00548 1077 ProSiteProfiles Protein kinase domain profile. 753 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00548 1077 CDD CAP_ED 481 590 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00548 Bpe08g00490 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00548 Bpe-Chr1:3552891 Bpe11g01273 Bpe-Chr11:9532508 3.80E-34 dispersed
Bpe13g00630 Bpe-Chr13:13235524 Bpe01g00548 Bpe-Chr1:3552891 2.17E-137 transposed
Bpe01g00548 Bpe-Chr1:3552891 Bpe08g00490 Bpe-Chr8:3190605 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63120 PF00481 PP2C 1.80E-34 CL0238 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00548 - - zju:107431937 1675.22