Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00555 ATGGAAACCGCGGAGGACGACCGGCCCGGCTCGCTTCCTGACCCAGAAGGATTATCTATGAGCTCATCAGGATCCTCCTCGCTTCTCGCCACATCTAGCTCCGGGGATATCTCCACCACCAGCGGCAGTTCTGGTGAAATTTCTGCCCTTCTGTTGTCGGAGTCTGTTTCGCCGATTCTAGAGGGTCCTACGTTGTCAGGCGAAGACTTGGAGAAAGTGACAATGAAGGAAGCGGGAAGGCCGAAGAAGTGCATCGGGAAGACCAATAGGAGGGTAAGTTGGGGGTTTACTTCGGTTATTGGAAGGCGGAAAGAGATGGAGGATGCTATCGCTATTTTTCCCGGTTTCATGTCCCCCACTTGCGATCATGTCGGTGGGTGTACGGCTTCCGGCTCCAGAACATCTGCCGAGATCTCGCCGATTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCGAGACGAATGCACGAGTTGATAGCAGAAGAGTGGGAAAAGGAAGTTGTAAACGGCTACGGATGGCAGAGGAGGTGGGAATTGGCACTGTCGAATGGTTTTGAGAGGACGGACAATGAAGTTGTGACAGAGACAGTAGCAGCCGATATGGTTGGATCGACGGCCGTTGTCGTTGTTTTATCGAGCTGCCAGATAATCGTATCCAACTGTGGAGACTCAAGGGCAGTGCTTGTTAGGCAGACTCAGACCATCCCTCTGACTGTGGATCAAAAGCCTGATCGAGAGGATGAACTCCAGCGAATTGAAGAACAGGGAGGGAAAGTCATAAACTGGATGGGCGCTAGAGTACTCGGAGTTCTTGCCATGTCGAGAGCCATAGGTGACAGGTACCTGCGGCCATGGATAATTCCAGATCCAGAGATTACTTTCACGAAGAGAAGCGACGAGGACGAATGTGTTATATTAGCGAGTGATGGGCTATGGGATGTAATGACCAATGAAGAGGTAGGTGAGATAGCTCGTCGATTTTTAAGACGGAGAGCTAGATTCGCGATGTCTAGCGAGACATGTCTGGCACAAGTTGTCGCAGATAATCTCACTGAAATAGCTCACGGAAGAAATAGTTCTGATAATATTTCTATTATCGTTATTGATTTGAAATCTAGGAGAACTCGGCCTCAGAAGCCG 1164 50.17 METAEDDRPGSLPDPEGLSMSSSGSSSLLATSSSGDISTTSGSSGEISALLLSESVSPILEGPTLSGEDLEKVTMKEAGRPKKCIGKTNRRVSWGFTSVIGRRKEMEDAIAIFPGFMSPTCDHVGGCTASGSRTSAEISPIHFFGVYDGHGGSQVAKFCARRMHELIAEEWEKEVVNGYGWQRRWELALSNGFERTDNEVVTETVAADMVGSTAVVVVLSSCQIIVSNCGDSRAVLVRQTQTIPLTVDQKPDREDELQRIEEQGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPDPEITFTKRSDEDECVILASDGLWDVMTNEEVGEIARRFLRRRARFAMSSETCLAQVVADNLTEIAHGRNSSDNISIIVIDLKSRRTRPQKP 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3601811 3604325 + Bpe024505 Bpe01g00555 97803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00555 388 CDD PP2Cc 95 378 IPR001932 -
Bpe01g00555 388 ProSiteProfiles PPM-type phosphatase domain profile. 93 378 IPR001932 -
Bpe01g00555 388 PANTHER ALPHABET, ISOFORM E-RELATED 50 387 - -
Bpe01g00555 388 MobiDBLite consensus disorder prediction 16 44 - -
Bpe01g00555 388 SMART PP2C_SIG_2 123 378 IPR001932 -
Bpe01g00555 388 Pfam Protein phosphatase 2C 96 371 IPR001932 -
Bpe01g00555 388 MobiDBLite consensus disorder prediction 1 44 - -
Bpe01g00555 388 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Bpe01g00555 388 Gene3D - 81 387 IPR036457 -
Bpe01g00555 388 SMART PP2C_4 82 376 IPR001932 -
Bpe01g00555 388 SUPERFAMILY PP2C-like 85 379 IPR036457 -
Bpe01g00555 388 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 50 387 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00555 Bpe08g00498 CCT
Bpe01g00555 Bpe08g00498 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00555 Bpe-Chr1:3601811 Bpe14g00271 Bpe-Chr14:2768293 8.29E-90 dispersed
Bpe01g00555 Bpe-Chr1:3601811 Bpe08g00498 Bpe-Chr8:3265320 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00555 K14497 - vvi:109121390 508.834