Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00568 ATGTCGTGGCAGGCGTACGTAGATGAACATTTGATGTGCGAAATCGATGGCCAGGGCCAGCATCTTGCCGCCGCTGCAATCCTCGGCCATGACGGTAGTGTTTGGGCCCAAAGCTCTTCCTTCCCTCAGTTGAATCCCAAGGAGATAGCTGACATCCTCAAAGATTTTGAAGAACCAGGTCACCTTGCTCCTACAGGTTTACACCTTGGGGCTGCAAAATACATGGTAATCCAAGGAGAGGCCGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGAATCACCATCAAGAAGACTGGACAAGCCCTAATTTTTGGCATCTATGAAGAGCCTATCACTCCAGGACAGTGCAACATGGTTGTTGAGAGGTTGGGGGATTACTTGATTGACCAAGGCCTTTAA 402 50.25 MSWQAYVDEHLMCEIDGQGQHLAAAAILGHDGSVWAQSSSFPQLNPKEIADILKDFEEPGHLAPTGLHLGAAKYMVIQGEAGAVIRGKKGSGGITIKKTGQALIFGIYEEPITPGQCNMVVERLGDYLIDQGL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3681794 3683516 - Bpe000548.1 Bpe01g00568 97816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00568 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Bpe01g00568 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Bpe01g00568 133 PANTHER PROFILIN 1 133 - -
Bpe01g00568 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bpe01g00568 133 SMART prof_2 1 133 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Bpe01g00568 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Bpe01g00568 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Bpe01g00568 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
Bpe01g00568 133 CDD PROF 2 132 IPR005455 GO:0003779
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00568 Bpe08g00505 CCT
Bpe01g00568 Bpe02g02225 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00568 Bpe-Chr1:3681794 Bpe13g01272 Bpe-Chr13:17925914 8.52E-73 wgd
Bpe01g00568 Bpe-Chr1:3681794 Bpe02g02225 Bpe-Chr2:23277124 1.98E-74 wgd
Bpe01g00568 Bpe-Chr1:3681794 Bpe08g00505 Bpe-Chr8:3342294 2.80E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00568 K05759 - jre:109010102 248.44