Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00601 ACGCAAAGCGGTACGTTTAAGGACGGTGATCTGCTTGTCAATAGGGATGGAGTTCGGATTGTAACTGAGAGCGAAGCTGAAGCTCCTCCTCCAATTAAACCCTCAGACAACAACCAGTTGAGTTTGGCAGATATAGACACAATCAAAGTCATTGGAAAAGGAAATGGTGGAATTGTGCAATTGGTGAGACACAAATGGACAGGCCAGTTTTTTGCATTAAAGGTAATTCAAATGAGCATTGACGAATCTTATCGCAAGCTGATAGCACAGGAACTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTATATGTTATCAGTCTTTCTATGACAATGGTGCCATTTCTATCATATTAGAGTACATGGATGGAGGATCTTTGGCTGATTTTTTGAAAAAGGTCAAAAAAATTCCGGAACCTTATCTTGCTGCCATCTGTTTGCAGGTGCTGAAAGGGTTGTCTTACCTGCATCATGAAAAGCACGTTATTCATAGGGACTTGAAACCTTCTAATTTGTTAATAAATCACAGAGGGGAAGTTAAAATCACTGACTTTGGTGTAAGTACCATGATGGCAACCACCTCTGGACTGGCAAATACTTTTGTGGGCACATATAACTATATGTCTCCAGAGCGAATTACTGGAGGCAGACATGACAATAAAAGTGACATCTGGAGCTTGGGATTAGTACTACTTGAGTGTGCGATAGGTCAATTCCCTTATTTGCCACCCGAGGGGGATGAAGGTTGGGTTAACTTTTATGAGCTGATGGAAGCCATTGTTGATCACCCACCACCTTCTGCTCCGCCAGACCAATTTTCTCCAGATTTCTGCTCATTTATTTCTGCGTGTGTACAAAAAGATCCAAAGGATAGACTTTCAGCACGAGAACTTCTGATGCACCCTTTCATCAGCACTCAGAAAGGCTTAGATGTCGATCTCTCATCTTACTTCACTGATGCAGGATCTCCCCTTGCTACTTTC 987 41.84 TQSGTFKDGDLLVNRDGVRIVTESEAEAPPPIKPSDNNQLSLADIDTIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMSIDESYRKLIAQELKINQSAQCPYVVICYQSFYDNGAISIILEYMDGGSLADFLKKVKKIPEPYLAAICLQVLKGLSYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSTMMATTSGLANTFVGTYNYMSPERITGGRHDNKSDIWSLGLVLLECAIGQFPYLPPEGDEGWVNFYELMEAIVDHPPPSAPPDQFSPDFCSFISACVQKDPKDRLSARELLMHPFISTQKGLDVDLSSYFTDAGSPLATF 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3948403 3950928 - Bpe024506 Bpe01g00601 97849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00601 329 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Bpe01g00601 329 Pfam Protein kinase domain 47 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00601 329 PIRSF ILK 12 302 - -
Bpe01g00601 329 Gene3D Transferase(Phosphotransferase) domain 1 125 324 - -
Bpe01g00601 329 PANTHER MAP KINASE KINASE 1 328 - -
Bpe01g00601 329 SUPERFAMILY Protein kinase-like (PK-like) 46 308 IPR011009 -
Bpe01g00601 329 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 328 - -
Bpe01g00601 329 Gene3D Phosphorylase Kinase; domain 1 23 124 - -
Bpe01g00601 329 ProSiteProfiles Protein kinase domain profile. 45 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00601 329 SMART serkin_6 45 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00601 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bpe01g00601 329 CDD PKc_MAPKK_plant_like 43 305 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00601 Bpe13g01246 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00601 Bpe-Chr1:3948403 Bpe11g00463 Bpe-Chr11:3584914 3.50E-40 dispersed
Bpe02g02226 Bpe-Chr2:23279875 Bpe01g00601 Bpe-Chr1:3948403 3.12E-148 transposed
Bpe03g00025 Bpe-Chr3:459401 Bpe01g00601 Bpe-Chr1:3948403 6.98E-73 transposed
Bpe01g00601 Bpe-Chr1:3948403 Bpe13g01246 Bpe-Chr13:17706733 1.61E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63124 PF00069 Pkinase 4.30E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00601 K20603 - mnt:21409949 546.584