Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00601 | ACGCAAAGCGGTACGTTTAAGGACGGTGATCTGCTTGTCAATAGGGATGGAGTTCGGATTGTAACTGAGAGCGAAGCTGAAGCTCCTCCTCCAATTAAACCCTCAGACAACAACCAGTTGAGTTTGGCAGATATAGACACAATCAAAGTCATTGGAAAAGGAAATGGTGGAATTGTGCAATTGGTGAGACACAAATGGACAGGCCAGTTTTTTGCATTAAAGGTAATTCAAATGAGCATTGACGAATCTTATCGCAAGCTGATAGCACAGGAACTGAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTATATGTTATCAGTCTTTCTATGACAATGGTGCCATTTCTATCATATTAGAGTACATGGATGGAGGATCTTTGGCTGATTTTTTGAAAAAGGTCAAAAAAATTCCGGAACCTTATCTTGCTGCCATCTGTTTGCAGGTGCTGAAAGGGTTGTCTTACCTGCATCATGAAAAGCACGTTATTCATAGGGACTTGAAACCTTCTAATTTGTTAATAAATCACAGAGGGGAAGTTAAAATCACTGACTTTGGTGTAAGTACCATGATGGCAACCACCTCTGGACTGGCAAATACTTTTGTGGGCACATATAACTATATGTCTCCAGAGCGAATTACTGGAGGCAGACATGACAATAAAAGTGACATCTGGAGCTTGGGATTAGTACTACTTGAGTGTGCGATAGGTCAATTCCCTTATTTGCCACCCGAGGGGGATGAAGGTTGGGTTAACTTTTATGAGCTGATGGAAGCCATTGTTGATCACCCACCACCTTCTGCTCCGCCAGACCAATTTTCTCCAGATTTCTGCTCATTTATTTCTGCGTGTGTACAAAAAGATCCAAAGGATAGACTTTCAGCACGAGAACTTCTGATGCACCCTTTCATCAGCACTCAGAAAGGCTTAGATGTCGATCTCTCATCTTACTTCACTGATGCAGGATCTCCCCTTGCTACTTTC | 987 | 41.84 | TQSGTFKDGDLLVNRDGVRIVTESEAEAPPPIKPSDNNQLSLADIDTIKVIGKGNGGIVQLVRHKWTGQFFALKVIQMSIDESYRKLIAQELKINQSAQCPYVVICYQSFYDNGAISIILEYMDGGSLADFLKKVKKIPEPYLAAICLQVLKGLSYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSTMMATTSGLANTFVGTYNYMSPERITGGRHDNKSDIWSLGLVLLECAIGQFPYLPPEGDEGWVNFYELMEAIVDHPPPSAPPDQFSPDFCSFISACVQKDPKDRLSARELLMHPFISTQKGLDVDLSSYFTDAGSPLATF | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3948403 | 3950928 | - | Bpe024506 | Bpe01g00601 | 97849 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00601 | 329 | ProSitePatterns | Protein kinases ATP-binding region signature. | 51 | 74 | IPR017441 | GO:0005524 | |
Bpe01g00601 | 329 | Pfam | Protein kinase domain | 47 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe01g00601 | 329 | PIRSF | ILK | 12 | 302 | - | - | |
Bpe01g00601 | 329 | Gene3D | Transferase(Phosphotransferase) domain 1 | 125 | 324 | - | - | |
Bpe01g00601 | 329 | PANTHER | MAP KINASE KINASE | 1 | 328 | - | - | |
Bpe01g00601 | 329 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 308 | IPR011009 | - | |
Bpe01g00601 | 329 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 1 | 328 | - | - | |
Bpe01g00601 | 329 | Gene3D | Phosphorylase Kinase; domain 1 | 23 | 124 | - | - | |
Bpe01g00601 | 329 | ProSiteProfiles | Protein kinase domain profile. | 45 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe01g00601 | 329 | SMART | serkin_6 | 45 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe01g00601 | 329 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 163 | 175 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe01g00601 | 329 | CDD | PKc_MAPKK_plant_like | 43 | 305 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00601 | Bpe13g01246 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00601 | Bpe-Chr1:3948403 | Bpe11g00463 | Bpe-Chr11:3584914 | 3.50E-40 | dispersed | |
Bpe02g02226 | Bpe-Chr2:23279875 | Bpe01g00601 | Bpe-Chr1:3948403 | 3.12E-148 | transposed | |
Bpe03g00025 | Bpe-Chr3:459401 | Bpe01g00601 | Bpe-Chr1:3948403 | 6.98E-73 | transposed | |
Bpe01g00601 | Bpe-Chr1:3948403 | Bpe13g01246 | Bpe-Chr13:17706733 | 1.61E-180 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63124 | PF00069 | Pkinase | 4.30E-68 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00601 | K20603 | - | mnt:21409949 | 546.584 |