Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00613 ATGAGTTGTAGTAGTAGATTTCCATTTACACCAGCTCAGTGGCAAGAGCTTGAGCACCAAGCTCTCATTTTTAAGTACATGGTCTCAGGCATCCCCATCCCTCCTGATCTTCTCTTTAGTGTCAAAAGAAACTGCTTGGATTCTCATCTCTTCCCTCGCCAACCTCAGCAAGTGGGGTGGAACTATTTAAACATGGGTCTGGGGAGAAAAATCGACCCAGAACCAGGGAGGTGCAGGAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTAATTTCAAAAGCACAACAACCAACCCAGAAGCAAACCTTTCACCATCACCAGTCCGGTCTTCCTGCCCAAACCAATTTTCTCTCTATACAAACCCTCATTCTCTGTTCTTGGATGCCAGCCGCCATTACCCCCAGCTTCACCATTCTTCTTTCCATAACAATACCCATCTTCACCCCCCTTCTCTTTATCGTCAAACCTCTTCAAGGCCACCTGGTTTTGTTTTGGACATGGAGACCCCCTCTTTCTTGGACTCGTGCTCTTACCCCCAGCTTGCAACAGATTACAGAAGAAATAGGTGTGCTTATCGGATGAAAGAGGAACTGGGTGAGTATGCTTTCTTCTCAGAATCTTCCGGAACAATGAGAAGCTTCTCAGCTTCTCCCATGGAGGATTCATGGCAGTTGACGCCTCTGACAATGAGTTGCTCTTCGTCCTCATCCAAACAGCGGGGCTTGAGTTTGCACAGTGATGACTACTCATACTTGCAGCTCCAAAGCGTCACTGAAACCACCGCGCCCCAAGGCCAACCTAAAAAAGCTCCTCCAATGGCAATGAAGATGGAGGGCGAAGAACCACAGAAGATCTTCCACCGTTTCTTCGACGAATGGCCACCGAAAGACAGAAACTCATGGCTTGAAGTCGATGATAAACCCTCAAATAACGGGTCAATCTCGACTACTCAGCTCTCCATTTCCATCCCAAACTCCACCCTGGATTTCTCCGTCTTCAATTCCAGAGTCCAGAGTGGAAATGAAAACTCAAGTATCAAGCCAGCTCATTTTTCAAATTCAGATCCCTAA 1149 46.82 MSCSSRFPFTPAQWQELEHQALIFKYMVSGIPIPPDLLFSVKRNCLDSHLFPRQPQQVGWNYLNMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVNFKSTTTNPEANLSPSPVRSSCPNQFSLYTNPHSLFLDASRHYPQLHHSSFHNNTHLHPPSLYRQTSSRPPGFVLDMETPSFLDSCSYPQLATDYRRNRCAYRMKEELGEYAFFSESSGTMRSFSASPMEDSWQLTPLTMSCSSSSSKQRGLSLHSDDYSYLQLQSVTETTAPQGQPKKAPPMAMKMEGEEPQKIFHRFFDEWPPKDRNSWLEVDDKPSNNGSISTTQLSISIPNSTLDFSVFNSRVQSGNENSSIKPAHFSNSDP 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4050465 4051844 - Bpe000593.1 Bpe01g00613 97861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00613 382 MobiDBLite consensus disorder prediction 103 133 - -
Bpe01g00613 382 PANTHER GROWTH-REGULATING FACTOR 6 5 353 - -
Bpe01g00613 382 MobiDBLite consensus disorder prediction 115 133 - -
Bpe01g00613 382 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bpe01g00613 382 PANTHER - 5 353 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bpe01g00613 382 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bpe01g00613 382 ProSiteProfiles WRC domain profile. 72 116 IPR014977 -
Bpe01g00613 382 MobiDBLite consensus disorder prediction 363 382 - -
Bpe01g00613 382 Pfam WRC 73 115 IPR014977 -
Bpe01g00613 382 SMART QLQ_2 7 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00613 Bpe13g01232 CCT
Bpe01g00613 Bpe08g00542 CCT
Bpe01g00613 Bpe08g00542 ECH
Bpe01g00613 Bpe13g01232 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00613 Bpe-Chr1:4050465 Bpe12g00610 Bpe-Chr12:11815549 7.63E-62 dispersed
Bpe01g00613 Bpe-Chr1:4050465 Bpe13g01232 Bpe-Chr13:17596724 1.85E-93 wgd
Bpe01g00613 Bpe-Chr1:4050465 Bpe08g00542 Bpe-Chr8:3704465 1.01E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20804 PF08879 WRC 8.10E-21 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00613 - - tcc:18588300 410.994