Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00618 ATGGGGGTTGGTAAGATATCATGGCGATCAGTTCTTCCATGCAGCAAGCCGGAGTGCGGGTCCAAGACCTGCACGAAAGTTATGGCGAAACAGAGCTCGTTTCAAAGGATTTCGCATCTGGAATTGAGCAATCCGGGGTCGATGCTGTCGGAGGATCTTTCGATGTCTCTCGTGGGATCTGATATTCATGTTTTCACCCTGGCTGAGTTGAAGGTGATAACCCAGAATTTCTCGGCTTCTAATTTCATCGGGGAAGGTGGGTTTGGACCTGTACACAAGGGTTTCATCGATGACAAGCTTAGACCAGGATTGAAGGCTCAGCCGGTGGCGGTGAAGCTTTTGGATTTGGATGGCACGCAGGGACATAGGGAGTGGCTGACTGAGGTGATTTTTCTGGGTCAGCTGAGGCATCCACACCTGGTAAAGCTTATAGGGTATTGCTGTGAAGATGAACACAGGCTACTCGTTTATGAATACATGCCGAGAGGCAGCTTAGAGAATCAACTCTTTAGAAGGTATTCGGCGTCGCTGCCGTGGTCGTCGAGAATGAAAATCGCTCTCGGCGCTGCGAAGGGTCTCGCTTTCCTCCACGAGGCCGAGAAACCAGTCATATATAGGGACTTCAAGGCTTCAAATATACTGCTAGACTCCGATTTCAGTTCAAAACTCTCAGACTTTGGTTTGGCGAAAGATGGGCCAGAAGGCGACGACACCCACGTCTCAACAAGAGTGATGGGGACGCATGGCTACGCTGCTCCCGAATATATCATGACTGGGCATTTGACGGCAATGAGTGACGTATACAGCTTCGGCGTGGTACTGCTAGAGCTTCTAACAGGGCGGAGATCGGTGGACAAGAGCCGGCCTCATAGGGAGCACAACTTGGTGGACTGGGCAAGGCCAATGCTCAATGACCCTCGAAAGCTTGCCCGAGTAATGGACCCGAGGCTGGAAGGCCAGTACTCAGAAGTGGGCGCTCGGAAGGCGGCGGAATTGGCTTATCAATGCCTGAGCCACCGCCCCAAGCACCGGCCCACCACGAGCGCCATCGTTAAGACTTTGGAGCCGCTGAAAGACTTCGATGACATCCTCGCCGGACCCTTCGTCTACACCGTTGCACCAGAGAGCCATGATTTGGGGAAGGAAGATGTCAAACAAAGCCCAGCACAGAGAGATGTAAACAAGGAAAACGGGGAGCGCCGCCATCATAATCATCAACGGAGATATCCAAAATCACCCAACGCCTACTCGGAGACAGCTCTCGGTCAAAATAACAGAAAGTAA 1284 52.02 MGVGKISWRSVLPCSKPECGSKTCTKVMAKQSSFQRISHLELSNPGSMLSEDLSMSLVGSDIHVFTLAELKVITQNFSASNFIGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGTQGHREWLTEVIFLGQLRHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSASLPWSSRMKIALGAAKGLAFLHEAEKPVIYRDFKASNILLDSDFSSKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSRPHREHNLVDWARPMLNDPRKLARVMDPRLEGQYSEVGARKAAELAYQCLSHRPKHRPTTSAIVKTLEPLKDFDDILAGPFVYTVAPESHDLGKEDVKQSPAQRDVNKENGERRHHNHQRRYPKSPNAYSETALGQNNRK 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4079956 4081568 + Bpe000596.1 Bpe01g00618 97866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00618 427 MobiDBLite consensus disorder prediction 377 427 - -
Bpe01g00618 427 Gene3D Phosphorylase Kinase; domain 1 44 159 - -
Bpe01g00618 427 MobiDBLite consensus disorder prediction 377 400 - -
Bpe01g00618 427 CDD STKc_IRAK 83 357 - -
Bpe01g00618 427 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 23 397 - -
Bpe01g00618 427 MobiDBLite consensus disorder prediction 410 427 - -
Bpe01g00618 427 ProSiteProfiles Protein kinase domain profile. 77 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00618 427 Gene3D Transferase(Phosphotransferase) domain 1 160 364 - -
Bpe01g00618 427 Pfam Protein tyrosine and serine/threonine kinase 81 354 IPR001245 GO:0004672|GO:0006468
Bpe01g00618 427 SUPERFAMILY Protein kinase-like (PK-like) 54 355 IPR011009 -
Bpe01g00618 427 PANTHER OS01G0588500 PROTEIN-RELATED 23 397 - -
Bpe01g00618 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00618 Bpe13g01228 CCT
Bpe01g00618 Bpe08g00550 CCT
Bpe01g00618 Bpe13g01228 ECH
Bpe01g00618 Bpe08g00550 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00618 Bpe-Chr1:4079956 Bpe03g00970 Bpe-Chr3:29240697 2.45E-159 dispersed
Bpe01g00725 Bpe-Chr1:5845013 Bpe01g00618 Bpe-Chr1:4079956 1.42E-144 transposed
Bpe11g01845 Bpe-Chr11:14845780 Bpe01g00618 Bpe-Chr1:4079956 7.35E-35 transposed
Bpe01g00618 Bpe-Chr1:4079956 Bpe13g01228 Bpe-Chr13:17567005 0 wgd
Bpe01g00618 Bpe-Chr1:4079956 Bpe08g00550 Bpe-Chr8:3824826 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63125 PF07714 PK_Tyr_Ser-Thr 4.30E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00618 - - jre:109008510 670.233