Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00628 CTTGAAAGCATATCCGAGGAAACTGCAGTCATTGACAGAAAACAGACCTTTTTAAATTTCGTTCCATACATTCGATCCGGAGAGTGGTCGGACATTGGAGGTCGTTCTCACATGGAGGATACTCACATCTGCATTGGGAATTTGGCTAAGAAATTTGATTATAATCTCACTGAAGAAGCTATCTCTTTCTATGGTTATCAATTTACTGAAAATCAGTTTATTGAACTTAAAACTGGGATTGCTTATTTTAAGGTATTTGATGGACATGGAGGAAGCGGTGCTGCTAAATTTGTTCGTGATCACTTACCGAGAGTAATTGTCGAAGATGCCGACTTTCCTTTGGAGCTTGAGAAGGTGATCACAAGGTCGTTTATGGAGACAGATGCCGCCTTTGCAAAAACATGCTCTGTCGAATCTTCCTTGTCTTCAGGCACAACTGCTCTTACTGCGATCATTTATGGAAGGTATAAAAAATTTCCTTGTGTTTTGCTTAGGAATATCATTTCTCGCAGGTCGTTGTTGGTGGCAAATGCCGGAGATTGTCGGGCTGTGCTTTCCCGGCGGGGAGGTGCAGTAGAAATGTCTAGAGACCACAGACCCTGTTGTTCAAAAGAGAGGATAAGAATTGAGGCCTTGGGAGGATACATCGACGACGATTATCTAAACGGACAATTAGGCGTAACTCGAGCATTGGGTGATTGGCATCTAGAAGGGATGAAGGAATCAAGCGAAAAGGGCGGCCCACTTAGTGCAGAACCCGAACTTAAACTAGCGACATTGACTTCAGATGACGAATTCTTGATCATAGGCAGCGATGGAATATGGGACGTTTTCACGAGCCAAAACGCAGTTGATTTTGCTCGGAGGAGACTTCAAGAGCACAACGACGTGAAGTTGTGCTGCAAAGAAGTTGTCGAGGAAGCTGTAAAGCGACGGGCAGTGGATAATCTGACAGTTGTCATAGTGAGCTTTCACTCGGAGCCACCTCAATCTTTAGCGGTCCAGAGGGGAAGAGTGAGGAGAAGCATATCGGCAGAGGGATTGCAGAGCCTTAAATTTTTGTTGGAAGGTTAG 1074 44.51 LESISEETAVIDRKQTFLNFVPYIRSGEWSDIGGRSHMEDTHICIGNLAKKFDYNLTEEAISFYGYQFTENQFIELKTGIAYFKVFDGHGGSGAAKFVRDHLPRVIVEDADFPLELEKVITRSFMETDAAFAKTCSVESSLSSGTTALTAIIYGRYKKFPCVLLRNIISRRSLLVANAGDCRAVLSRRGGAVEMSRDHRPCCSKERIRIEALGGYIDDDYLNGQLGVTRALGDWHLEGMKESSEKGGPLSAEPELKLATLTSDDEFLIIGSDGIWDVFTSQNAVDFARRRLQEHNDVKLCCKEVVEEAVKRRAVDNLTVVIVSFHSEPPQSLAVQRGRVRRSISAEGLQSLKFLLEG 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4185663 4187141 + Bpe000605.2 Bpe01g00628 97876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00628 357 CDD PP2Cc 24 324 IPR001932 -
Bpe01g00628 357 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 155 - -
Bpe01g00628 357 SUPERFAMILY PP2C-like 14 326 IPR036457 -
Bpe01g00628 357 Gene3D - 10 329 IPR036457 -
Bpe01g00628 357 PANTHER PROTEIN PHOSPHATASE 2C 1 155 IPR015655 GO:0004722|GO:0006470
Bpe01g00628 357 Pfam Protein phosphatase 2C 35 316 IPR001932 -
Bpe01g00628 357 ProSiteProfiles PPM-type phosphatase domain profile. 25 324 IPR001932 -
Bpe01g00628 357 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 164 345 - -
Bpe01g00628 357 PANTHER PROTEIN PHOSPHATASE 2C 164 345 IPR015655 GO:0004722|GO:0006470
Bpe01g00628 357 SMART PP2C_4 15 322 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00628 Bpe-Chr1:4185663 Bpe04g00287 Bpe-Chr4:1838362 4.94E-106 dispersed
Bpe03g00229 Bpe-Chr3:3079683 Bpe01g00628 Bpe-Chr1:4185663 1.86E-30 dispersed
Bpe02g01233 Bpe-Chr2:15945062 Bpe01g00628 Bpe-Chr1:4185663 9.32E-115 transposed
Bpe01g00628 Bpe-Chr1:4185663 Bpe04g00089 Bpe-Chr4:656553 1.09E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20805 PF00481 PP2C 7.50E-61 CL0238 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00628 K14803 - fve:101296420 490.345