Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00640 ATGCAGCCCTGCAGCAGAGAAATGCAAGCGATGAACTCCATCTTCAACCAGGACCTTCAACCAGATCACGAACAGATCTCTTCTTCTCATCTCCATCAACCTCTTCTCCTTTTCCAATCCTCTCATTTCGATTCCTCCGACGATTTTCTCGACCAGTTTCTCTCCAACGTCCCTCCCTCTTCCTCCTCCTGGCAAGACCTGAAATCCCCTTGGGATCTCAACCACTCTGGTTCTAATTCCTCTGTTATTAGCAAGCTTGGGGACCTCTCTGATGACACGCCGCCGTCCAATCTCGATGCTCTCGGTTTTCAATTAGAGGAATCGGCCGGTTTGGCTGCCAAACTACGTAATCACCAGATTACTTCATCTTATCCGGCAGCGAGAGCGGCAATGATTCTTCAACAACAGCAGTTAATGGCCGGAGCTGGAGTTTCTAATTCCGGTCTTCCTCCGATGCCTCAGTCTTTAAGCGCAGCTGACCTTGAGCGCTCCGAGAATGACATCGTCGACGGTCCATCGTCCTTCAAAACCCCTATCCTTAATTGGATCTTCATGCCTGTACACGGTTCCGCCACATCTTTTGAGGATTCTCGGAGCCGATCAGACGTTGAAATTGATTTCCATTCGGTCGATTTACAGGGAGGTTCGACGCAGGCACAAAACTTCGGAGCACAGGGCAGCGTATCGGGAGGCGCGCCAGCTCAATCGAAACCGAAAGTAAGGGCTCGCAGAGGTCAAGCCACTGACCCTCACAGCATCGCTGAAAGATTACGCCGGGAGAGAATCGCGGAGCGGATGAAATCACTGCAGGAGCTCGTTCCCAATGCCAACAAGACCGACAAGGCTTCAATGCTGGATGAGATTATTGATTACGTGAAATTCCTCCAGCTTCAAGTCAAGGTTTTGAGCATGAGTAGATTAGGGGGTGCAGCTGCTGTAGCTCCTCTTGTTGCTGATAAATCTGATGGCGGGGGTGACCGTGTTGAAACCAATGGCCAGGGCGGGGCCAAGTCGAAGCAAACGGTGCTGCCTAATGAAAGCTTGACCATGACTGAGCAGCAAGTGGCGCAGCTAATGGAGAAGGATATGGGGTCAGCCATGCAGTATCTACAGGGCAAGGGTCTCTGCCTCATGCCCATTTCTCTAGCCACTGCTATATCCACCTCCACTGGTCACTCTCGTAATACCATGATCAACCACCTCCTATCAGCCAACGGTGATGGCCCCGCTTCCCCCAGTATGTCCGTCTTGACCGTCCAATCTACCACCCTCTGTGTCAATGACACTTCTGCCAAAGATGTGGCCTCTGTTTCCAAGCCTTGA 1323 51.55 MQPCSREMQAMNSIFNQDLQPDHEQISSSHLHQPLLLFQSSHFDSSDDFLDQFLSNVPPSSSSWQDLKSPWDLNHSGSNSSVISKLGDLSDDTPPSNLDALGFQLEESAGLAAKLRNHQITSSYPAARAAMILQQQQLMAGAGVSNSGLPPMPQSLSAADLERSENDIVDGPSSFKTPILNWIFMPVHGSATSFEDSRSRSDVEIDFHSVDLQGGSTQAQNFGAQGSVSGGAPAQSKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADKSDGGGDRVETNGQGGAKSKQTVLPNESLTMTEQQVAQLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTGHSRNTMINHLLSANGDGPASPSMSVLTVQSTTLCVNDTSAKDVASVSKP 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4315263 4318238 + Bpe000616.1 Bpe01g00640 97888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00640 440 SMART finulus 252 301 IPR011598 GO:0046983
Bpe01g00640 440 PANTHER TRANSCRIPTION FACTOR BHLH69 40 399 - -
Bpe01g00640 440 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 246 295 IPR011598 GO:0046983
Bpe01g00640 440 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 399 - -
Bpe01g00640 440 Gene3D - 241 303 IPR036638 GO:0046983
Bpe01g00640 440 MobiDBLite consensus disorder prediction 222 249 - -
Bpe01g00640 440 Pfam Helix-loop-helix DNA-binding domain 251 296 IPR011598 GO:0046983
Bpe01g00640 440 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 244 306 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00640 Bpe02g02124 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00640 Bpe-Chr1:4315263 Bpe11g01332 Bpe-Chr11:9959231 8.40E-60 dispersed
Bpe02g01776 Bpe-Chr2:20088959 Bpe01g00640 Bpe-Chr1:4315263 7.03E-19 dispersed
Bpe11g01227 Bpe-Chr11:9172418 Bpe01g00640 Bpe-Chr1:4315263 1.11E-17 dispersed
Bpe11g00207 Bpe-Chr11:1408095 Bpe01g00640 Bpe-Chr1:4315263 2.96E-24 transposed
Bpe01g00640 Bpe-Chr1:4315263 Bpe13g01167 Bpe-Chr13:17101286 7.56E-134 wgd
Bpe01g00640 Bpe-Chr1:4315263 Bpe02g02124 Bpe-Chr2:22621844 1.51E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20807 PF00010 HLH 1.80E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00640 - - vvi:100243222 418.313