Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00643 ATGAAAGTTGTTGGAAAAGAAAAGGTGATAAAGGTAGGAATGATGGAGCAGATTAAAAGGGAAATCTCTGTGATGAAGATGGTGAAGCATCCGAATATCGTAGAGCTTCACGAGGTTATGGCTAGCAAATCCAAGATCTATTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCGCTAAGGTCGCCAAAGGACGCCTGAGGGAAGACGTCGCTAGAGTCTATTTCCAGCAGCTAATTTCCGCGATCGATTTTTGCCATAGTCGCGGCGTTTTCCACAGGGATTTGAAGCCCGAAAATCTCCTTCTCGACGAAGATGGAAATCTCAAAGTTACCGATTTCGGACTGAGTGCCTTCTCTGAGCAGTTGCAGAACGGATTACTCCACACAAGCTGCGGAACTCCAGCGTATGTCGCGCCGGAAGTGATCGGAAAAATGGGCTACGATGGCGCCAAAGCCGATCTATGGTCCTGCGGCGTCATTCTCTACGTACTCCTTGCCGGATATCTTCCTTTTCAGGATGATAATCTGGTCGCCATGTACAGAAAAATCTACAAGGGCGACTTCAAATGTCCGCCATGTTTCTCTCCTGATGCTCGTAGACTCATCATAAAGCTCTTGGACCCGAACCCATCGACCCGGATAACAACAGAAATGATTATGGAATCCTCCTGGTTTAAGAAATCTGTTCCGAAATCCATAATCACGAAAGAGGAGCAGGAATTCGAAAAATGCGAGAAATTTATGAAGGAGCGAGAGACATTAAATGCATTTCACATTATTTCGTTATCCCAGGGTTTTGATTTATCGCCATTGTTCGAGGGGAAGAAGAGGGAGGAGAAAGAGGAGCTGAGATTCGCGACGACAAGGCCGGCGAGCAGTGTGATATCCAAGCTGGAGGAGGTTGCAGAGGCGGTGAAGTTCGAGGTTCAGAAGAGCGACTCCATGGTAAGGCTGCAAGGGAAGGAGCGAGGAAGAAAAGGGAAGCTGGCCATAGCGGCGGAGATATTCGCCATGACGCCGTCGTTTCTGGTGGTGGAGGTGAAGAAGGACCATGGCGATACGTTCGAATACAACCAGTTCTGCAACAAGGAGCTTCGTCCTGCTCTCAAAGACATTCTATGGACTTCCCCTTCTGAAAATTCCATGTCTGCTGCTTGA 1161 48.66 MKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVYFQQLISAIDFCHSRGVFHRDLKPENLLLDEDGNLKVTDFGLSAFSEQLQNGLLHTSCGTPAYVAPEVIGKMGYDGAKADLWSCGVILYVLLAGYLPFQDDNLVAMYRKIYKGDFKCPPCFSPDARRLIIKLLDPNPSTRITTEMIMESSWFKKSVPKSIITKEEQEFEKCEKFMKERETLNAFHIISLSQGFDLSPLFEGKKREEKEELRFATTRPASSVISKLEEVAEAVKFEVQKSDSMVRLQGKERGRKGKLAIAAEIFAMTPSFLVVEVKKDHGDTFEYNQFCNKELRPALKDILWTSPSENSMSAA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4332488 4333648 - Bpe000619.1 Bpe01g00643 97891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00643 386 Gene3D Transferase(Phosphotransferase) domain 1 58 253 - -
Bpe01g00643 386 Gene3D Kinase associated domain 1, KA1 254 376 - -
Bpe01g00643 386 SMART serkin_6 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00643 386 PANTHER - 1 383 - -
Bpe01g00643 386 ProSiteProfiles NAF domain profile. 250 274 IPR018451 GO:0007165
Bpe01g00643 386 CDD CIPK_C 256 371 - -
Bpe01g00643 386 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00643 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Bpe01g00643 386 Pfam Protein kinase domain 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00643 386 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 383 - -
Bpe01g00643 386 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Bpe01g00643 386 Pfam NAF domain 253 312 IPR004041 GO:0007165
Bpe01g00643 386 SUPERFAMILY Protein kinase-like (PK-like) 1 241 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00643 Bpe-Chr1:4332488 Bpe11g01580 Bpe-Chr11:11867642 6.64E-169 dispersed
Bpe08g00057 Bpe-Chr8:306082 Bpe01g00643 Bpe-Chr1:4332488 4.44E-124 transposed
Bpe01g00643 Bpe-Chr1:4332488 Bpe04g00078 Bpe-Chr4:610135 3.32E-149 wgd
Bpe01g00643 Bpe-Chr1:4332488 Bpe08g00661 Bpe-Chr8:6880093 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63127 PF00069 Pkinase 8.90E-63 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00643 - K07198 csv:101211847 649.047