Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00647 ATGTTTGATCGTGGTTACAAGTCACATATCATGGGAGGCCAGCGTGAGAAGTTTGTGAGGTTGGATGATTTAGACTCTAGAACCTCATCTCCAGATACTAGGGTGCTGAACTGTGGATTTGGCGGTGATGGATTCAACCGCACTGCCCATGGAAGTGATAAAACATCTAGATCTTTTAAGAGAAGAGTGAGAAAAGGGTCTGAGGGACTTAAGTCAATTGGCCGCTCTATTGGATTAGGAGTATCACGGGCAGTATTTCCAGAAGATCTAAAAGTTTCAGAGAAGAAGATATTTGATCCTCAAGATAAATTCCTCCTGTTTTGCAATAAACTTTTTGTCATATCATGTATTTTGGCCGTGTCTGTGGACCCTCTGTTTTATTATCTTCCAGTCATCAATGAAAAATCAAATTGTCTTGGCATCGATAAAAAGCTTGCCCTAACCGTGACAACGCTAAGGACTATTATTGATGGGTTCTATCTCATTCATATGGCTCTCCAGTTCCGAACAGCTTACATTGCTCCATCATCTCGGGTTTTCGGAAGAGGGGAGCTTGTGATAGATACTGCAAAAATTGCAAAACGGTACTTGCGGCTGTATTTTATAATCGATTTCCTTGCAGTACTGCCCCTGCCACAGATTGTGGTCTGGAGATTTCTTGATAGCTCACATGGTTCCAGCGTATTTTCAACTAAGCAGGCATTACTTTTCATTGTTTTGTTTCAATACATCCCAAGATTCCTCCGTATATTACCCTTAACATCAGAATTAAAAAGGACAGCTGGTGTATTTGCTGAAACTGCTTGGGCTGGTGCTGTTTATTATCTTCTATTATATATGCTCGCAAGTCATATAGTTGGAGCATTCTGGTATTTAATGGCTGTGGAACGAAATGATACATGCTGGCAAGGAGCTTGCAAGGGAAACTGCAAAAAGGAGTTTTTGTACTGTGGTAATCAACAAATGGAAGGTTTTGAGGCTTGGAATACTACAGGTGCAGCTTTTCTCCTCTCAAATTGCACCATCGAGGGCAAGAACCCACCATTTGATTTTGGAATCTTCCAACAAGCTTTGGAATCTGGTATTGTATCTTCCACGAAATTCGTCACTAAATACTGTTACTGTTTATGGTGGGGACTGCAAAATTTAAGTACTCTCGGGCAGGGTCTTAAAACCAGCACCTATCCCGGGGAAGTGATTTTCTCCATTGCGCTGGCCGTGCTTGGGCTCATTCTTTTTGCTCTTCTTATTGGCAACATGCAGACCTATCTTCAATCTCTTACCATACGGCTCGAGGAGATGAGGATCAAAAGGCGTGACTCCGAACAGTGGATGCACCATCGTTTGCTTCCACAGGAACTTAGGGAGCGAGTTAGACGCTATGATCAATATAAGTGGCTGGAAACTCGTGGTGTGGATGAACAGAGTTTGGTTCACAGTCTACCAAAGGATCTTCGGAGAGATATTAAGCGGCACCTCTGCCTTGCGTTAGTGAGAAGGGTTCCTCTGTTTGAGAGCATGGATGAGAGGCTATTGGATGCCATTTGTGAGCGGCTGAAACCATGTTTATTCACCGAGAGCACATACATTGTGCGTGAAGGAGATCCAGTCGATGAAATGCTCCTCATCATACGTGGTCGCCTCGAGAGTGAAACCACCGACGGAGGACGAAGTGGCTTTTTCAACCGAAGTTTTCTCAAACAAGGTGATTTCTGTGGAGAGGAGCTTCTGACATGGGCCTTAGACCCCAAATCTGGGGTGAATCTCCCTTCCTCAACCAGGACGGTTAAGGCAATAACAGAGGTCGAGGCCTTTGCTCTAACAGCTGAAGACTTGAAATTTGTGGCAAGCCAGTTCAGGAGGCTTCACAGTCGACAGGTTCAACACACCTTCCGTTTTTACTCTCAGCAGTGGCGAACTTGGGCTGCTTCCTTTATACAAGCGGCTTGGCGGCGCCATTTGAAGAGGAAGACCATGGAGCTTCGCCGGAAGGAAGAAGAGGAAGATGAAGATGGGTACGAGACTGTCGGCCAAAATGTAGCCGCAGGTTCGTATAGTCTTGGTGCCACTTTCTTAGCTTCAAAATTTGCTGCAAATGCTCTTCGCGGTGTTCACCGATACAGGCTAGCCAAAACCGCCACCGATTTGGTGAAACTACAGAAGCCTCCTGAACCAGATTTTACAGCAGATGATGCCGACTGA 2202 44.96 MFDRGYKSHIMGGQREKFVRLDDLDSRTSSPDTRVLNCGFGGDGFNRTAHGSDKTSRSFKRRVRKGSEGLKSIGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLFCNKLFVISCILAVSVDPLFYYLPVINEKSNCLGIDKKLALTVTTLRTIIDGFYLIHMALQFRTAYIAPSSRVFGRGELVIDTAKIAKRYLRLYFIIDFLAVLPLPQIVVWRFLDSSHGSSVFSTKQALLFIVLFQYIPRFLRILPLTSELKRTAGVFAETAWAGAVYYLLLYMLASHIVGAFWYLMAVERNDTCWQGACKGNCKKEFLYCGNQQMEGFEAWNTTGAAFLLSNCTIEGKNPPFDFGIFQQALESGIVSSTKFVTKYCYCLWWGLQNLSTLGQGLKTSTYPGEVIFSIALAVLGLILFALLIGNMQTYLQSLTIRLEEMRIKRRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVHSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLLIIRGRLESETTDGGRSGFFNRSFLKQGDFCGEELLTWALDPKSGVNLPSSTRTVKAITEVEAFALTAEDLKFVASQFRRLHSRQVQHTFRFYSQQWRTWAASFIQAAWRRHLKRKTMELRRKEEEEDEDGYETVGQNVAAGSYSLGATFLASKFAANALRGVHRYRLAKTATDLVKLQKPPEPDFTADDAD 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4382640 4388833 - Bpe000624.1 Bpe01g00647 97895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00647 733 Pfam Cyclic nucleotide-binding domain 525 614 IPR000595 -
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 281 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 164 173 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 398 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 416 425 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 466 473 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 PRINTS EAG/ELK/ERG potassium channel family signature 372 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00647 733 SUPERFAMILY cAMP-binding domain-like 433 623 IPR018490 -
Bpe01g00647 733 CDD CAP_ED 503 634 IPR000595 -
Bpe01g00647 733 ProSiteProfiles IQ motif profile. 639 668 IPR000048 GO:0005515
Bpe01g00647 733 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 730 - -
Bpe01g00647 733 Gene3D Helix hairpin bin 431 494 - -
Bpe01g00647 733 SUPERFAMILY Voltage-gated potassium channels 100 425 - -
Bpe01g00647 733 SMART cnmp_10 503 634 IPR000595 -
Bpe01g00647 733 ProSiteProfiles cAMP/cGMP binding motif profile. 503 633 IPR000595 -
Bpe01g00647 733 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 730 - -
Bpe01g00647 733 Pfam Ion transport protein 109 429 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe01g00647 733 Gene3D - 109 428 - -
Bpe01g00647 733 Gene3D Jelly Rolls 501 621 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00497 Bpe-Chr1:3177400 Bpe01g00647 Bpe-Chr1:4382640 1.28E-17 dispersed
Bpe01g00647 Bpe-Chr1:4382640 Bpe10g00594 Bpe-Chr10:12858504 0 dispersed
Bpe03g00239 Bpe-Chr3:3180852 Bpe01g00647 Bpe-Chr1:4382640 1.76E-108 dispersed
Bpe11g01439 Bpe-Chr11:10686813 Bpe01g00647 Bpe-Chr1:4382640 4.24E-124 dispersed
Bpe12g00640 Bpe-Chr12:12029994 Bpe01g00647 Bpe-Chr1:4382640 9.66E-136 dispersed
Bpe01g00647 Bpe-Chr1:4382640 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00647 K05391 - csv:101219180 1191.41