Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00660 ATGGTATTGATAGAGCTGGACGAGACTGAGGAGAACAGTTATAATCCCCGTCGAGAATCGGCGTCCACCGAAACTATGGGAAACGGGAAGGTGGAATCTCCAGATGGATTTGAAACTGCTAGCGATGGGGAAATTGGTGACAGTGGCGATGAAAATGAAGAGGAACTGAATCAGAAGCCACGGAAGGAAGAACAAGGAGAGGAATTTGAAAAACAAGAAACTGAAAATTTGAGCCCGGATGAAATGATGCAGAAGGCTTTAGCTCAAGCAAATGATGCAAAAATGGAAGGCAATAAGTTCTTTGGACAAGCCAAATACGACGAAGCTCTGATGCAGTATGAGGTTGCCTTACAAACAGCACCAGACATACCCTCATCTGTGGAATTACGTTCTATTTGCCATGCTAATTGTGGCATATGTTATATGAAACAGGGGAAATATGAAGAGACAATCAAGGAATGCACAAAAGCATTAGAACTCAATCCCACATATATGAAAGCTCTGATTAGGAGAGGAGAGGCTCATGAAAAACTTGAACATTTTGAGGAGGCAATTGTTGACATGAAAAAAATATTGGAGTTGGATTCCTCAAATGAACAAGCTAAGAGATCTATTCGTCGCTTGGAACCTCTTGCTGAACAGAAGCGGGAAAAGATGAAGGAAGAAATGATTGGAAAGTTGAAGGAAATGGGCAATTCTTTGCTCGGTCGCTTTGGAATGAGCCTGGACAATTTTAAAGCTGTAAAAGATCCAAATACCGGGTCGTATTCTGTTTCATACCAGCAGTAG 789 41.83 MVLIELDETEENSYNPRRESASTETMGNGKVESPDGFETASDGEIGDSGDENEEELNQKPRKEEQGEEFEKQETENLSPDEMMQKALAQANDAKMEGNKFFGQAKYDEALMQYEVALQTAPDIPSSVELRSICHANCGICYMKQGKYEETIKECTKALELNPTYMKALIRRGEAHEKLEHFEEAIVDMKKILELDSSNEQAKRSIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRFGMSLDNFKAVKDPNTGSYSVSYQQ 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4569714 4572052 - Bpe000636.1 Bpe01g00660 97908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00660 262 ProSiteProfiles TPR repeat profile. 131 164 IPR019734 GO:0005515
Bpe01g00660 262 SUPERFAMILY TPR-like 88 218 IPR011990 GO:0005515
Bpe01g00660 262 MobiDBLite consensus disorder prediction 52 78 - -
Bpe01g00660 262 Gene3D Tetratricopeptide repeat domain 79 224 IPR011990 GO:0005515
Bpe01g00660 262 Pfam Tetratricopeptide repeat 167 197 IPR019734 GO:0005515
Bpe01g00660 262 SMART tpr_5 131 164 IPR019734 GO:0005515
Bpe01g00660 262 SMART tpr_5 165 198 IPR019734 GO:0005515
Bpe01g00660 262 SMART tpr_5 90 123 IPR019734 GO:0005515
Bpe01g00660 262 MobiDBLite consensus disorder prediction 1 80 - -
Bpe01g00660 262 Pfam Tetratricopeptide repeat 133 164 IPR001440 GO:0005515
Bpe01g00660 262 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 24 262 - -
Bpe01g00660 262 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 24 262 - -
Bpe01g00660 262 ProSiteProfiles TPR repeat profile. 165 198 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00660 Bpe08g00760 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00660 Bpe-Chr1:4569714 Bpe08g01018 Bpe-Chr8:12443843 1.06E-13 dispersed
Bpe07g00463 Bpe-Chr7:7181939 Bpe01g00660 Bpe-Chr1:4569714 3.32E-10 dispersed
Bpe01g00029 Bpe-Chr1:246431 Bpe01g00660 Bpe-Chr1:4569714 6.89E-16 transposed
Bpe01g00770 Bpe-Chr1:7530600 Bpe01g00660 Bpe-Chr1:4569714 9.64E-15 transposed
Bpe10g00540 Bpe-Chr10:12457611 Bpe01g00660 Bpe-Chr1:4569714 2.53E-11 transposed
Bpe14g00591 Bpe-Chr14:4941396 Bpe01g00660 Bpe-Chr1:4569714 1.22E-13 transposed
Bpe01g00660 Bpe-Chr1:4569714 Bpe08g00677 Bpe-Chr8:7451247 1.96E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00660 K24926 - mnt:112092832 349.362