Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00671 ATGAATCTGCGAATAGTGGTGACATTATTTCGGACTTTTGCTGACATTTTCTATCTCCTCCATATGGTCATCAAGTTTCGGACTGCATATGTCTCTCCATCCTCCCGTATTTTTGGAAGAGGTGAACTTGTCATGGACCCAAAGAAGATCGCGTGGAGGTATATTCAATCCGACTTTTTCATCGATCTCATTGCCACTCTGCCTCTTCCTCAGATGGTCATCTGGTTTATCATACCAGCGACGAGAAGCCCTCAAACGGATCATAATAACAATGCTCTTGCCCTCATCGTGCTCTTTCAATACGTTCCGAGATTATATTTGATTTTTCCGTTAAGTTCAGAGATAATTAAAGCAACAGGAGTTGTGACGAAAACGGCATGGGCCGGAGCAGCTTATAACCTGCTGCTCTACATGTTGGCTAGCCATGTATTAGGGGCGGCCTGGTATTTACTATCTATTGACCGGTACACTTCTTGCTGGAAATCGTTGTGCAGAAAGAAAGAGTTTAACCCTATAAAATGTCTGCCTACTTACTTGGATTGTGATGTTTTCAATCACGTTGACCGAAAAATTTGGGCGAATTCCACAACTGTGTTTGAGAACTGCGATCCTGATGGGGGGACTTTCATGTATGGCATTTTTAAAGATGCATTGTCGAAAGAGGTTGTGTCGACAAACTTTATGAGGAAATATTTCTATTGCTTGTGGTGGGGTTTACAAAACCTGAGTTCGTACGGGCAAAATTTGGATACAAGCACTTTCATCGGAGAGACCTTATTCGCCATTCTCATCGCCATCTTGGGTCTTGTTTTATTTGCTCACCTCATAGGGAATATGCAGACTTATTTGCAATCCATCACCATTAGGCTCGAGGAATGGCGACTCAAGCAAAGAGACACCGAGGAGTGGATGATACACCGGCAACTTCCTGGGGATCTGAAACAACGAGTGCGGCGTTTTGTACAATATAAATGGCTCGCCACTCGAGGGGTCGATGAAGAAGCCATATTGCATAGCTTACCAGCTGATCTTCGTCGCGATATTCAGAGACACCTTTGCTTAGACCTCGTTCGACGAGTCCCTTTCTTCTCACAAATGGATGATCGGCTGCTAGATGCGATATGCGAGCGGCTAGTATCCTCGCTAAGCACTCAAGGCACTTACATCGTCCGAGAGGGTGATCCCGTGACGGAAATGCTTTTTATAATCCGGGGAATGCTGGAGAGTTCTACAACCAACGGAGGTCGGACCGGTTTCTTCAATTCCATAACTTTACGGCCCGGAGATTTTTGCGGGGAGGAGCTTCTTGCATGGGCCCTACAGCCGAAATCGACCGTCAACTTGCCATCTTCAACTAGGACGGTCAAGGCTCTAAACGAAGTCGAAGCATTTGCACTTCGTGCGGAGGACCTGAAATTTGTGGCTAACCAATTTAGAAGGCTGCATAGCAAGAAATTACAGCATACGTTTCGGTTTTACTCGCACCATTGGAGGACATGGGCGGCATGTTTTATTCAGGCTGCATGGCGTCGACACAAGAAGCGAATGATGACAAAAAGTCTCTCCATGAAGGAATCTTCGACTTTGTATGAGGAAGAGGAAGTAGACGATGGAAAACAACATGGCGAGGATGACCAAGTTCTCGATGGTTCAGATCCTTCGCAGCCAAAAATGAATATCCATACCACGATACTTGCTTCGAGATTCACTGCAAATGCAAGAAGGAACACCCAGAAGACAAACTTAGTGAAGCCTCACGAACCGGATTTTTCTGTCTATGCCGATGAGTGA 1791 45.51 MNLRIVVTLFRTFADIFYLLHMVIKFRTAYVSPSSRIFGRGELVMDPKKIAWRYIQSDFFIDLIATLPLPQMVIWFIIPATRSPQTDHNNNALALIVLFQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSIDRYTSCWKSLCRKKEFNPIKCLPTYLDCDVFNHVDRKIWANSTTVFENCDPDGGTFMYGIFKDALSKEVVSTNFMRKYFYCLWWGLQNLSSYGQNLDTSTFIGETLFAILIAILGLVLFAHLIGNMQTYLQSITIRLEEWRLKQRDTEEWMIHRQLPGDLKQRVRRFVQYKWLATRGVDEEAILHSLPADLRRDIQRHLCLDLVRRVPFFSQMDDRLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGMLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALQPKSTVNLPSSTRTVKALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMTKSLSMKESSTLYEEEEVDDGKQHGEDDQVLDGSDPSQPKMNIHTTILASRFTANARRNTQKTNLVKPHEPDFSVYADE 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4729042 4732291 - Bpe000647.1 Bpe01g00671 97919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00671 596 SUPERFAMILY Voltage-gated potassium channels 3 284 - -
Bpe01g00671 596 SMART cnmp_10 362 493 IPR000595 -
Bpe01g00671 596 Pfam Ion transport protein 5 288 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe01g00671 596 MobiDBLite consensus disorder prediction 527 559 - -
Bpe01g00671 596 MobiDBLite consensus disorder prediction 574 596 - -
Bpe01g00671 596 Gene3D Helix hairpin bin 290 353 - -
Bpe01g00671 596 SUPERFAMILY cAMP-binding domain-like 292 484 IPR018490 -
Bpe01g00671 596 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 593 - -
Bpe01g00671 596 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 2 593 - -
Bpe01g00671 596 Pfam Cyclic nucleotide-binding domain 385 473 IPR000595 -
Bpe01g00671 596 Gene3D Jelly Rolls 360 480 IPR014710 -
Bpe01g00671 596 MobiDBLite consensus disorder prediction 527 550 - -
Bpe01g00671 596 CDD CAP_ED 362 493 IPR000595 -
Bpe01g00671 596 ProSiteProfiles cAMP/cGMP binding motif profile. 362 445 IPR000595 -
Bpe01g00671 596 Gene3D - 2 287 - -
Bpe01g00671 596 PRINTS EAG/ELK/ERG potassium channel family signature 275 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00671 596 PRINTS EAG/ELK/ERG potassium channel family signature 325 332 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00671 596 PRINTS EAG/ELK/ERG potassium channel family signature 22 31 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00671 596 PRINTS EAG/ELK/ERG potassium channel family signature 257 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe01g00671 596 PRINTS EAG/ELK/ERG potassium channel family signature 139 149 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00198 Bpe-Chr1:1194717 Bpe01g00671 Bpe-Chr1:4729042 0 dispersed
Bpe01g00671 Bpe-Chr1:4729042 Bpe02g00224 Bpe-Chr2:1549514 0 dispersed
Bpe07g01072 Bpe-Chr7:16122315 Bpe01g00671 Bpe-Chr1:4729042 3.76E-126 dispersed
Bpe01g00671 Bpe-Chr1:4729042 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00671 K05391 - csv:101218643 983.4