Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00674 ATGGGTTCTTGCTTCAGCTTCTGTGGTGAGGAGAAAGTAGATGAAGGGGTTCCGACCTACTTCGGAGGTAACCCTTCATGGAGAATTTTTACGTACAAGGAACTGCACACGGCTACAAATGGGTTTGACGAGGAGAACAAGCTTGGAGAAGGAGGTTTCGGAAGCGTTTATTGGGGGAAGACGAGTGATGGTCTTCAGATAGCAGTTAAGAAACTGAAGGCGATGACTTACAAGGCCGAGATGGAATTTGCGGTAGAGGTCGAAGTTCTCGCGAGGCTTCAGCACAAGAATCTATTAGGTCTTCGGGGTTACTGTGTCGGAACTGATCAACGTCTGATAGTTTACGATTACATGCCGAATCTGAGTCTGCTTTCTCATCTGCATGGCCAATTTGCTGATGAAGTTCAATTAGACTGGAAGAAGAGGATGAAAATAGCACTAGGCTCTGCAGAAGGCATACTGTACTTACACCAGGAGGTGACCCCCCACATAATACACCGAGATATCAAAGCCAGCAACGTACTGTTGGACTCAGACTTCGAGCCACTGGTTGCAGATTTTGGGTTCGCCAAGCTCATACCAGAGGGAGTGAGCCATATGACGACTCGAGTCAAAGGAACCCTCGGTTACCTTGCACCAGAATATGCAATGTGGGGGAAGGTTTCAGAAAGCTGCGACGTCTACAGCTTCGGCATTCTTCTTCTCGAGCTGGTGACAGGAAGAAAACCGATCGAAAAACTCCCAGGTGGAGCGAAAAGAACGATCACAGAATGGGCTGAACCCTTGATTCTCAAGGGGAGGGTAAAAGAACTGGTTGATAGACGGCTGAGAGGGAATTTTGATGAGATGGAGTTGAGAACCGCCATTAATGTAGCTTCCATGTGCGTGCAGAGCGAGGCCGAGAGGCGGCCGAAGATGAAGGAAGTGGTGGAGCTGCTAAAAGGGGATGCACAGAAGGGGAAGAATATGCAGTTGAGGATTAAGAGTGTCAAGTATAATGAGGAGTTGTTGGAGCTTGATCAGATCAGTCATGTCAAAAATGGTGAAGTTGCAGAGGAGAGCTGCAATGATTATGGGGTTTTTAGTGCTCTGGAGGGGCAGAAGATGCAAGGGAATCATATCAAAAGGGTTGGAGATTGGCGAATGGGTCAACGGGTTTAA 1161 47.89 MGSCFSFCGEEKVDEGVPTYFGGNPSWRIFTYKELHTATNGFDEENKLGEGGFGSVYWGKTSDGLQIAVKKLKAMTYKAEMEFAVEVEVLARLQHKNLLGLRGYCVGTDQRLIVYDYMPNLSLLSHLHGQFADEVQLDWKKRMKIALGSAEGILYLHQEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGAKRTITEWAEPLILKGRVKELVDRRLRGNFDEMELRTAINVASMCVQSEAERRPKMKEVVELLKGDAQKGKNMQLRIKSVKYNEELLELDQISHVKNGEVAEESCNDYGVFSALEGQKMQGNHIKRVGDWRMGQRV 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4778182 4780470 - Bpe000650.1 Bpe01g00674 97922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00674 386 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 383 - -
Bpe01g00674 386 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Bpe01g00674 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Bpe01g00674 386 SUPERFAMILY Protein kinase-like (PK-like) 22 313 IPR011009 -
Bpe01g00674 386 Pfam Protein kinase domain 43 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00674 386 CDD STKc_IRAK 48 315 - -
Bpe01g00674 386 Gene3D Phosphorylase Kinase; domain 1 21 117 - -
Bpe01g00674 386 ProSiteProfiles Protein kinase domain profile. 42 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00674 386 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00674 386 PANTHER OS01G0750732 PROTEIN 1 383 - -
Bpe01g00674 386 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00674 Bpe-Chr1:4778182 Bpe10g00604 Bpe-Chr10:12925200 6.25E-142 dispersed
Bpe01g00674 Bpe-Chr1:4778182 Bpe03g00601 Bpe-Chr3:26227540 6.59E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63129 PF00069 Pkinase 4.90E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00674 - - rcu:8262025 595.504