Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00675 ATGGGATTTGTCCACAATATCGGGAAGTATCAGCTGGGACGGACGATTGGAGAGGGAAACTTTGCCAAGGTTAAGCTCGCAGTGGATAGTACTAATGGCCACCATGTCGCTATAAAGATCATCGACAAACACATGGTTATGGAAAGCAATCTCAAATCTCAGGTACACAGAGAGATAAGAACGATGAAGCTTCTGCATCATCTTAACATTGTTAGAATACATGAGGTTATAGGTTCAAAATCAAAGATTTACCTTGTCATGGAGTATGTTTCAGGAGGACAACTTTCAGACAGGATGTCATTTTACGAGAAACTTGGGGAGGAGGAAGGAAGGAAAATTTTTCAGCAACTGATTGATGCAGTAGATTATTGCCATAACAAAGGTGTATATCACAGAGATCTAAAGCCGGAAAACTTGCTTCTGGATCAGAAAGGCAATCTCAAGATATCTGATTTTGGACTTAGTGCATTCAAGAAGCCCGGTGGCTTGCTAACTACAGCCTGTGGCTCTCCTAGCTATGTCGCGCCAGAGCTGCTCGTAAATCGCGGTTACGACGGGGCGGCTGCAGATGTTTGGTCGTGCGGAATAGTTCTTTTCGAGTTACTTGCTGGGTGCTTGCCGTTCGAGGATCGAAACCTGATGAACTTGTACAAGAAGATCTCGAGAGCAGATTTCACTTTTCCAAACTGGTTTTCAGAGGGAGAAAAAAAGCTGATTTCCAGAATTCTTGAACCTGATCCAAGAAAGAGAATTACAATCTCAGAGATAATAGAGGATCCCTGGTTTCAAGAAGATTACGTCCCTACTTACGGATACGAGAGCCAAGAGAAGATCTATGTGGATGATGTTAATGCTGCATTTGATTCTATTGAGCACGAAAACATCGTCGAGGCGAAGATGCCGAAATCGTCGAGTTTTATAAACGCGTTTCAGCTGATTGCAATGTCGAACGATCTTGATTTATCAGGTCTTTTTGAAGGACAGGATGAACACAAGCAAAAGTCGAGATTCGGATCGAAGCTCACTATCAAAGAAACGATAGAGAAAATTGAAGCTGCGGCCACGGATGCCAGCTTATCGGTGGAAAAAATAAACAATTTCAGGATGAAAATTCATCCAAAACAAAAGATGACTAGATGTTCTAGATCACATTTAGACCTATCAGCAGAGGTGATTGAGGTTGGTCCAACCGACTGTGTCATCGAAGTGTCGAAATCTGCCGGAGAACTCATAACCTACGACAAGTTCTGCAGAAATTTAACGAGTCTTTTGACACAGAAGCCGGATTCTTTTCCAGAGCTTCAACCTTTGGACAAAATCTCCATCGCACATGAAATCCAATGCTCGGCAGACTCGTGA 1359 42.83 MGFVHNIGKYQLGRTIGEGNFAKVKLAVDSTNGHHVAIKIIDKHMVMESNLKSQVHREIRTMKLLHHLNIVRIHEVIGSKSKIYLVMEYVSGGQLSDRMSFYEKLGEEEGRKIFQQLIDAVDYCHNKGVYHRDLKPENLLLDQKGNLKISDFGLSAFKKPGGLLTTACGSPSYVAPELLVNRGYDGAAADVWSCGIVLFELLAGCLPFEDRNLMNLYKKISRADFTFPNWFSEGEKKLISRILEPDPRKRITISEIIEDPWFQEDYVPTYGYESQEKIYVDDVNAAFDSIEHENIVEAKMPKSSSFINAFQLIAMSNDLDLSGLFEGQDEHKQKSRFGSKLTIKETIEKIEAAATDASLSVEKINNFRMKIHPKQKMTRCSRSHLDLSAEVIEVGPTDCVIEVSKSAGELITYDKFCRNLTSLLTQKPDSFPELQPLDKISIAHEIQCSADS 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4820344 4822947 + Bpe000651.1 Bpe01g00675 97923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00675 452 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Bpe01g00675 452 Gene3D Kinase associated domain 1, KA1 302 426 - -
Bpe01g00675 452 Gene3D Transferase(Phosphotransferase) domain 1 90 286 - -
Bpe01g00675 452 PANTHER SERINE/THREONINE KINASE 6 430 - -
Bpe01g00675 452 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00675 452 Pfam NAF domain 305 363 IPR004041 GO:0007165
Bpe01g00675 452 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00675 452 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00675 452 CDD CIPK_C 308 420 - -
Bpe01g00675 452 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 430 - -
Bpe01g00675 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bpe01g00675 452 SUPERFAMILY Protein kinase-like (PK-like) 7 304 IPR011009 -
Bpe01g00675 452 Gene3D Phosphorylase Kinase; domain 1 3 89 - -
Bpe01g00675 452 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00675 Bpe-Chr1:4820344 Bpe11g00973 Bpe-Chr11:7228150 6.17E-145 dispersed
Bpe01g00675 Bpe-Chr1:4820344 Bpe01g00862 Bpe-Chr1:17657866 1.28E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63130 PF00069 Pkinase 3.70E-74 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00675 - - qsu:112022749 660.603