Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00707 ATGGCTAGTACTGGAGATGATCTCAATAATTACTGGGATGGCGATATCTTTCTAAGAGCCGAAGAATTTGACAGCTGGGGATTGGACGAGACTTTGTCGAGTTATTATGATTCTAGCTCACCGGATGGTTCTGCGTCAAAAAACATAGTTACGGAGAGGAATAGGAGGAAGAAGCTAAACGAAAAACTGTTCGCACTCAGAGCTGTAGTTCCTAACATTACAAAGATGGATAAGGCGTCGATAATCAAAGACGCCATAGACTATATCCAAGAGCTTCAAGAGCAAGAGAGAATACTCCAAGCGGAAATAGAAGAGTTAGAGAGCGGAACGGCCTTGAAAGGCGTTGGAGGCCTCGACTTCGAGCGAGATCTACCGATTCTACTCCGATCAAAGAAAAGGAAGACGGAACAGCTCAGTGATCCTGGAGGATCTGGAAGTTCTCCCCTTGAAGTCCTCGATCTGAGTGTTACATTCATGGGAGACAAAACAGTGGTGGTGAGCTTGACGTGCACGAAGAGAACGGAAACAATGGTGAAACTGTGTGAAGTGTTTGAAACGATGAAGCTGAAAGTCATCACTGGGAGCATCATTGTGGTGTCTGGGAGACTTACCAAGACCCTTTTCATCGAGGCAGAGGAAGAAGAGAAAGATGGTATAAAGCTACAAATAGAGACGGCCATTGCAGTCTTCAATGGCCCACAGAGTCCAATGAGCATCTGA 720 45.56 MASTGDDLNNYWDGDIFLRAEEFDSWGLDETLSSYYDSSSPDGSASKNIVTERNRRKKLNEKLFALRAVVPNITKMDKASIIKDAIDYIQELQEQERILQAEIEELESGTALKGVGGLDFERDLPILLRSKKRKTEQLSDPGGSGSSPLEVLDLSVTFMGDKTVVVSLTCTKRTETMVKLCEVFETMKLKVITGSIIVVSGRLTKTLFIEAEEEEKDGIKLQIETAIAVFNGPQSPMSI 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5334000 5336401 + Bpe000683.1 Bpe01g00707 97955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00707 239 SMART finulus 49 98 IPR011598 GO:0046983
Bpe01g00707 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
Bpe01g00707 239 Pfam Helix-loop-helix DNA-binding domain 50 93 IPR011598 GO:0046983
Bpe01g00707 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 108 IPR036638 GO:0046983
Bpe01g00707 239 Coils Coil 82 109 - -
Bpe01g00707 239 Gene3D - 38 109 IPR036638 GO:0046983
Bpe01g00707 239 PANTHER TRANSCRIPTION FACTOR BHLH35 8 232 - -
Bpe01g00707 239 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00707 Bpe13g01099 CCT
Bpe01g00707 Bpe02g02065 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00707 Bpe-Chr1:5334000 Bpe02g02065 Bpe-Chr2:22176952 2.64E-50 dispersed
Bpe01g00707 Bpe-Chr1:5334000 Bpe13g01099 Bpe-Chr13:16569000 6.01E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20814 PF00010 HLH 2.00E-12 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00707 - - vvi:100244514 298.13