Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe01g00740 | ATGGAGGATTATCATGTGGCTGAATACAGACGAACGAAAAATCACGAGCTGGGATTGTTTGCGATATTTGACGGTCACCTCGGGGATCGAGTCCCATCCTTCTTGAAAGAGCACCTCTTCAACAAAATTCTTGATGAGCCAAATTTCTTCGAAGACCAAGAGGAGGCAATCAAGAATGCATATCACTCCACTAATAAGTTTATCTTGGAAAACTCTATCCAATTTGGTCCTGGTGGCTCTACTGCAGTAACTGCCATAGTCATTGACGGCAAAGACTTGTGGGTAGCAAACATTGGTGACTCGAGAGCTGTTGTGTGTGAGAGGGGTTCTGCCAATCAACTTACAGTAGACCATGAGCCACATAATGAACGCCCAAGGATAGAGAAGCATGGGGGCTTCGTGACTACCTTACCTGGAGATGTACCTCGAGTTAATGGTCAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTTAAAGAACATTTAAGTGCAGATCCCGATGTAAGACACGTTCCTATAGACCCGACCATTGAATTTGTTATTTTGGCAAGTGATGGACTATGGAAGGTTATGAAGAATCAAGAGGCAGTTGATCTGATTAAGCCCATTAAAGATCCTCAAGCAGCAGCTAAGCGATTAGCGAACGAGGCATTGGCTAGAAAAAGCAAAGACGACATATCATGCATTGTGATTCGGTTTGGATAA | 708 | 43.93 | MEDYHVAEYRRTKNHELGLFAIFDGHLGDRVPSFLKEHLFNKILDEPNFFEDQEEAIKNAYHSTNKFILENSIQFGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLTVDHEPHNERPRIEKHGGFVTTLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDPTIEFVILASDGLWKVMKNQEAVDLIKPIKDPQAAAKRLANEALARKSKDDISCIVIRFG | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 6460606 | 6470740 | - | Bpe000723.1 | Bpe01g00740 | 97988 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe01g00740 | 235 | CDD | PP2Cc | 1 | 234 | IPR001932 | - | |
| Bpe01g00740 | 235 | SMART | PP2C_4 | 1 | 232 | IPR001932 | - | |
| Bpe01g00740 | 235 | Gene3D | - | 1 | 235 | IPR036457 | - | |
| Bpe01g00740 | 235 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 1 | 235 | - | - | |
| Bpe01g00740 | 235 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 235 | - | - | |
| Bpe01g00740 | 235 | Pfam | Protein phosphatase 2C | 1 | 227 | IPR001932 | - | |
| Bpe01g00740 | 235 | SUPERFAMILY | PP2C-like | 1 | 235 | IPR036457 | - | |
| Bpe01g00740 | 235 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 234 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe01g00740 | Bpe-Chr1:6460606 | Bpe11g00460 | Bpe-Chr11:3574637 | 6.14E-104 | dispersed | |
| Bpe05g00762 | Bpe-Chr5:20980903 | Bpe01g00740 | Bpe-Chr1:6460606 | 2.42E-37 | transposed | |
| Bpe01g00740 | Bpe-Chr1:6460606 | Bpe08g00594 | Bpe-Chr8:4303300 | 6.38E-158 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe01g00740 | K17506 | - | cpap:110811361 | 416.387 |