Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00747 ATGATGAGCTGCGTCGATGTTGTTGCATCTGAGCAACTGTGCTACATCCCCTGCAACTTTTGCAATATCGTTCTTGCGGTGAGTGTTCCATGCAACAATTTATTTGACATTGTAACAGTACGATGTGGACACTGCACCAATCTGTGGTCCGTGAACATGGCTGCAGCATTTCAGGCACTGTCATGGCAAGATTTACAGGCACCACTCAACCTATACACTGCCCCAGACCAGCACAAGATTGATTCAGCATCGACATCAATTTTCGCTAACAAGTTGGCAAAACGCCCTCCAATTTCAAATCCAACCAAAGAAATGATGGTGACTCGAGCCCCTGAGAAGAGGCAGCGAGTACCTTCTGCATACAATCAGTTCATAAAAGAGGAAATACAAAGGATTAAGACTAATAATCCAGATATTAGTCACAGGGAAGCATTCAGCACTGCTGCAAAAAATTGGGCGCACTTCCCACGTATTCATTTCGGGCTAATGCTGGACACAAGCAACCAGCCAAAGCAGGACAATGTAAGAACTTTAAAGGTATGTAAATTACGATTTTGTAAATTCTAA 567 43.39 MMSCVDVVASEQLCYIPCNFCNIVLAVSVPCNNLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDLQAPLNLYTAPDQHKIDSASTSIFANKLAKRPPISNPTKEMMVTRAPEKRQRVPSAYNQFIKEEIQRIKTNNPDISHREAFSTAAKNWAHFPRIHFGLMLDTSNQPKQDNVRTLKVCKLRFCKF 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6729826 6732969 - Bpe000730.1 Bpe01g00747 97995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00747 188 PANTHER PROTEIN YABBY 6-RELATED 1 176 IPR006780 GO:0007275
Bpe01g00747 188 SUPERFAMILY HMG-box 99 155 IPR036910 -
Bpe01g00747 188 Gene3D High mobility group box domain 100 158 IPR036910 -
Bpe01g00747 188 PANTHER AXIAL REGULATOR YABBY 5 1 176 - -
Bpe01g00747 188 Pfam YABBY protein 9 162 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00747 Bpe02g02129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00275 Bpe-Chr1:1654687 Bpe01g00747 Bpe-Chr1:6729826 1.28E-62 dispersed
Bpe01g00747 Bpe-Chr1:6729826 Bpe13g01156 Bpe-Chr13:17012747 4.54E-68 dispersed
Bpe13g01366 Bpe-Chr13:18891140 Bpe01g00747 Bpe-Chr1:6729826 1.87E-40 dispersed
Bpe01g00747 Bpe-Chr1:6729826 Bpe02g02129 Bpe-Chr2:22651365 2.14E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20815 PF04690 YABBY 1.00E-67 CL0114 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00747 K25796 - vvi:100254328 275.404