Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00775 ATGGTGATCTCGAAGAAGTTCAGAGGTGTCAGGCAGAGACATTGGGGATCATGGGTATCGGAGATTCGTCACCCATTACTAAAGAGAAGGATATGGCTAGGAACATTTGATACAGCCGAAGAGGCAGCCAAAGCATACGATCAAGCAGCCGTTTTAATGAGCGGCCAGAATGCCAAAATTAATTTTCCTTCGGCTTCCCTCAGAGACTCCAAGACCAGGGTGGATTCACCGTCTTCACCGGAAAATTTATCAGAAATTCTCCATGCCAAGCTAAGAAAGTGCTGCAAATCTCCTTCGCCTTCAATGACCTGCTTGAGACTCGACGCACAGAATTCTTATATCGGCGTTTGGCAAAAGCGTGCGGGTCAAAGCGCCGAATCCAACTGGGTCATGACATTTCAGCTAGGGAATGAGAAGAAAAATTGTCTTGAGATTTCGCCTTCTTCCCCTTCGTCTTTCAGGCAAGTTCAGCTTCCGCCATCGGAAGCGCCTGAAGTCGTTCCCGCTCAGATCAATGAAGAAGAGGCACTTGCACTGCAAATGATAGAGGAACTGCTTTCTATTAACGAGGATGAGAAATTGTACCATTAG 591 46.87 MVISKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFDTAEEAAKAYDQAAVLMSGQNAKINFPSASLRDSKTRVDSPSSPENLSEILHAKLRKCCKSPSPSMTCLRLDAQNSYIGVWQKRAGQSAESNWVMTFQLGNEKKNCLEISPSSPSSFRQVQLPPSEAPEVVPAQINEEEALALQMIEELLSINEDEKLYH 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7912872 7913619 - Bpe000764.1 Bpe01g00775 98023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00775 196 Pfam AP2 domain 6 50 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 191 - -
Bpe01g00775 196 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 191 - -
Bpe01g00775 196 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bpe01g00775 196 SUPERFAMILY DNA-binding domain 6 63 IPR016177 GO:0003677
Bpe01g00775 196 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00775 Bpe13g01056 CCT
Bpe01g00775 Bpe13g01056 ECH
Bpe01g00775 Bpe02g02027 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00775 Bpe-Chr1:7912872 Bpe02g02027 Bpe-Chr2:21876454 4.20E-79 dispersed
Bpe01g00775 Bpe-Chr1:7912872 Bpe13g01056 Bpe-Chr13:16205097 1.88E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20817 PF00847 AP2 1.20E-12 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00775 - - qsu:112002896 238.81