Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00775 | ATGGTGATCTCGAAGAAGTTCAGAGGTGTCAGGCAGAGACATTGGGGATCATGGGTATCGGAGATTCGTCACCCATTACTAAAGAGAAGGATATGGCTAGGAACATTTGATACAGCCGAAGAGGCAGCCAAAGCATACGATCAAGCAGCCGTTTTAATGAGCGGCCAGAATGCCAAAATTAATTTTCCTTCGGCTTCCCTCAGAGACTCCAAGACCAGGGTGGATTCACCGTCTTCACCGGAAAATTTATCAGAAATTCTCCATGCCAAGCTAAGAAAGTGCTGCAAATCTCCTTCGCCTTCAATGACCTGCTTGAGACTCGACGCACAGAATTCTTATATCGGCGTTTGGCAAAAGCGTGCGGGTCAAAGCGCCGAATCCAACTGGGTCATGACATTTCAGCTAGGGAATGAGAAGAAAAATTGTCTTGAGATTTCGCCTTCTTCCCCTTCGTCTTTCAGGCAAGTTCAGCTTCCGCCATCGGAAGCGCCTGAAGTCGTTCCCGCTCAGATCAATGAAGAAGAGGCACTTGCACTGCAAATGATAGAGGAACTGCTTTCTATTAACGAGGATGAGAAATTGTACCATTAG | 591 | 46.87 | MVISKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFDTAEEAAKAYDQAAVLMSGQNAKINFPSASLRDSKTRVDSPSSPENLSEILHAKLRKCCKSPSPSMTCLRLDAQNSYIGVWQKRAGQSAESNWVMTFQLGNEKKNCLEISPSSPSSFRQVQLPPSEAPEVVPAQINEEEALALQMIEELLSINEDEKLYH | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7912872 | 7913619 | - | Bpe000764.1 | Bpe01g00775 | 98023 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00775 | 196 | Pfam | AP2 domain | 6 | 50 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | CDD | AP2 | 5 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 191 | - | - | |
Bpe01g00775 | 196 | PANTHER | AP2-EREBP TRANSCRIPTION FACTOR | 1 | 191 | - | - | |
Bpe01g00775 | 196 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe01g00775 | 196 | SUPERFAMILY | DNA-binding domain | 6 | 63 | IPR016177 | GO:0003677 | |
Bpe01g00775 | 196 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00775 | Bpe13g01056 | CCT | |
Bpe01g00775 | Bpe13g01056 | ECH | |
Bpe01g00775 | Bpe02g02027 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00775 | Bpe-Chr1:7912872 | Bpe02g02027 | Bpe-Chr2:21876454 | 4.20E-79 | dispersed | |
Bpe01g00775 | Bpe-Chr1:7912872 | Bpe13g01056 | Bpe-Chr13:16205097 | 1.88E-85 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20817 | PF00847 | AP2 | 1.20E-12 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00775 | - | - | qsu:112002896 | 238.81 |