Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00788 CTTAATCCATCACTAATGGCGGAAAATTCAGACCATGCAGTGGTTTTGAACGTGAAAGACGAAGTAGAGAAGGCCGACTGGCCATCCTCCTCGATTTTATCTGTACCTTTCATCCAGAAGATAATTGCAGAGGTGTTGGGGACGTATTTTCTGATATTTGCAGGGTGTTCGTCTGTGGCGGTGAATCTGAATGAGGACAAAGTGGTGACTCTTCCTGGTATTTCGATCGTTTGGGGGCTTGTCGTGATGGTGATGATCTACTCTCTCGGCCATATCTCCGGCGCTCATTTCAACCCCGCTGTCACCATTGCCTTCGCTTCCACTAAAAGATTTCCATGGATACAGGTAGGGCCATATGTATTAGCTCAGATCCTCGGATCAACCCTAGCAAGTGGGACCATTAAACTAATATTCAGCGACAAACCAGACCATTTTGTGGGAACGGCTCCTTCTGGATCAAATATGCAGTCACTCATCATTGAATTCATAATAACTTTTTACCTCATGTTCGTCGTCTCTGGCGTCGCCACCGACAATCGAGCGATTGGGGAGCTTGCCGGTATTGCAGTAGGGTCAACGGTGCTTCTAAACGTGTTGTTTGCAGGGCCAATTACAGGAGCATCGATGAATCCAGCAAGAAGCTTCGGGCCAGCTCTGGTTTACAGCCACTACAGAGGATTATGGATATACATAGTGGGTCCAATTCTTGGGGCAATATCCGGTGCATGTGTCTACAACATCATCAGATTCACTGACAAACCCTTGAGAGAAATCACCAAATCTTCCTCTTTCCTCAAGAGGGCTGCATCCAAAAAT 816 46.69 LNPSLMAENSDHAVVLNVKDEVEKADWPSSSILSVPFIQKIIAEVLGTYFLIFAGCSSVAVNLNEDKVVTLPGISIVWGLVVMVMIYSLGHISGAHFNPAVTIAFASTKRFPWIQVGPYVLAQILGSTLASGTIKLIFSDKPDHFVGTAPSGSNMQSLIIEFIITFYLMFVVSGVATDNRAIGELAGIAVGSTVLLNVLFAGPITGASMNPARSFGPALVYSHYRGLWIYIVGPILGAISGACVYNIIRFTDKPLREITKSSSFLKRAASKN 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8316502 8317844 + Bpe024523 Bpe01g00788 98036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00788 272 PANTHER AQUAPORIN NIP2-1 10 267 IPR034294 -
Bpe01g00788 272 Pfam Major intrinsic protein 34 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 PANTHER AQUAPORIN NIP1-1-RELATED 10 267 - -
Bpe01g00788 272 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Bpe01g00788 272 Gene3D Glycerol uptake facilitator protein. 5 260 IPR023271 -
Bpe01g00788 272 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe01g00788 272 SUPERFAMILY Aquaporin-like 33 259 IPR023271 -
Bpe01g00788 272 TIGRFAM MIP: MIP family channel proteins 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00788 Bpe08g00745 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00788 Bpe-Chr1:8316502 Bpe08g00745 Bpe-Chr8:9076455 1.41E-143 dispersed
Bpe01g00788 Bpe-Chr1:8316502 Bpe09g00441 Bpe-Chr9:11404443 8.81E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00788 K09874 - fve:101306876 394.43