Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe01g00795 | TTTCCAGATCGAAATCTAACCATGTCTAATTCACCTCAAAGAAAAATGGGTAGGGGAAAGATCGAGATCAAACGGATCGAAAACACTACAAATCGTCAAGTCACTTTCTGCAAAAGGAGAAACGGGTTGCTGAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTTGCTCTCATAGTCTTCTCCACCCGGGGTCGTCTCTACGAGTATGCAAATAACAGTGTCAAAGAAACAATTAGGAGGTATAAAAAAGTAAGCTGTAATTCGCCAAACACCGGCTCGATTTCGGAAGCTAATGCTCAGTTTTACCAAAAAGAAGCTGATAAGTTCCGGACGCTGATTGCTAACTTGCAAAATTCAAACAAAAATATGATGGCAGAATCTGTAAGTTCCCTGCCTATGAATGAATTGAGAAAAATGGATGGTAAGTTAGAGAAAGCAATTAGCAAGATCAGATCCAAAAAGAATGAGCTGCTCTTTGCAGAGATTGAGTACATGCGCAAAAGGGAAATCGACTTGCACAACAATAATCAGCTTCTTCGAGCGAAGATAACAGAGAATGAGAGAAACCAGCAAAACATGAACGTGATGGGAGGAAGAAGCTTTGAACTAATGCAGTCTCAACAATTTGACGTGAGAAACTATTTTCAAGTGAATGCATTACAACCCACCACTCAGGAGTATCCACGTCATGACCACATGTCCCTTCAATTAGGGTAA | 726 | 40.77 | FPDRNLTMSNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKETIRRYKKVSCNSPNTGSISEANAQFYQKEADKFRTLIANLQNSNKNMMAESVSSLPMNELRKMDGKLEKAISKIRSKKNELLFAEIEYMRKREIDLHNNNQLLRAKITENERNQQNMNVMGGRSFELMQSQQFDVRNYFQVNALQPTTQEYPRHDHMSLQLG | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8708264 | 8714270 | + | Bpe000781.1 | Bpe01g00795 | 98043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe01g00795 | 241 | ProSiteProfiles | K-box domain profile. | 102 | 192 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe01g00795 | 241 | CDD | MADS_MEF2_like | 17 | 91 | IPR033896 | GO:0000977|GO:0045944 | |
Bpe01g00795 | 241 | Pfam | K-box region | 100 | 186 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe01g00795 | 241 | PRINTS | MADS domain signature | 38 | 53 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | PRINTS | MADS domain signature | 53 | 74 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | PRINTS | MADS domain signature | 18 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | Coils | Coil | 102 | 129 | - | - | |
Bpe01g00795 | 241 | PANTHER | FLORAL HOMEOTIC PROTEIN AGAMOUS-LIKE | 16 | 229 | - | - | |
Bpe01g00795 | 241 | SUPERFAMILY | SRF-like | 17 | 91 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | ProSitePatterns | MADS-box domain signature. | 18 | 72 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | Coils | Coil | 139 | 166 | - | - | |
Bpe01g00795 | 241 | Gene3D | - | 29 | 91 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | SMART | madsneu2 | 16 | 75 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 25 | 72 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | ProSiteProfiles | MADS-box domain profile. | 16 | 76 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe01g00795 | 241 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 16 | 229 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00795 | Bpe-Chr1:8708264 | Bpe02g01071 | Bpe-Chr2:13324724 | 2.38E-98 | dispersed | |
Bpe01g00794 | Bpe-Chr1:8638153 | Bpe01g00795 | Bpe-Chr1:8708264 | 3.28E-171 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20819 | PF01486 | K-box | 4.40E-21 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe01g00795 | K09264 | - | qsu:112006550 | 358.607 |