Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00814 ATGGACGAAATCAAGGCATTGATCAACCATAAGAGCCGCCGCCTTATCGTCAACATCTCCGATCTACATTCCTTCCGCGATCTCGGTCCCAGAGTTCTTAGGAATCCAAGTGAGTACATGCAATCATTCTGTGATGCTGTCACAGAAGCTGCACGTAGCATTGATCAAAAGTACCTCAAGGAAGGAGAGCAAGTTTTGGTGGGTTTTGAGGGCCCTTTTGTCTCTCGCCGTGTCACACCCAGAGAACTTCTCTCTGAGTTCATTGGCTCCATGGTCTGTGTGGAGGGAATCATTACCAAATGTTCTCTTGTGCGGCCAAAAGTTGTCAAAAGTGTTCACTTCTGTCCCAAAACTGGGAGTTTTACCAGTCGTGAATACAGAGATATTACATCCAACATGGGTTTACCTACTGGCTCTGTTTATCCTACAAGGGATGAAAGTGGGAACTTGTTGGTTACTGAATATGGATTGTGTAAATACAAAGATCATCAAGCCTTATCAATGCAAGAAGTTCCAGAGATTTCAGCTCCTGGCCAGCTTCCAAGAACAGTTGATGTGATAGTGGAGGATGACTTGGTTGATTCATGCAAGCCTGGAGATCGCGTTGCTATTGTCGGAATATACAAAGCACTTCCTGGGAAAAGTAAAGGCTGTGTGAACGGAGTATTTAGGACTGTTCTCATAGCGAATAATGTCTCCTTGCTCAACAAAGAGTCAAATGCACCAATTTACAATCCGGAGGACTTGAAAAACATTAAAAAGATTGCTGAAAGAGACGATGCATTTGAACTTCTTGGTAACTCCCTCGCACCTTCTATTTACGGGCATTCATGGATAAAGAAAGCAGTGATATTGTTGATGCTTGGCGGAGTGGAAAAGAACTTGAAAAATGGTACTCACTTGCGAGGTGATATTAATATGATGATGGTTGGGGATCCCTCTGTTGCCAAGTCTCAGTTACTAAGAGCAATATTGAATATTGCCCCCTTGGCGATCTCAACAACCGGGCGTGGTTCTTCTGGTGTTGGTTTGACTGCTGCTGTTACTTCTGATCAAGAGACTGGAGAGAGAAGGCTAGAAGCTGGTGCAATGGTTCTTGCTGATAGAGGTGTAGTCTGCATAGATGAGTTTGACAAGATGAATGATCAAGATCGTGTTGCGATACATGAAGTTATGGAGCAACAGACAGTAACTATTGCAAAAGCTGGTATACATGCGTCACTGAATGCAAGGTGTAGCGTAATAGCTGCTGCAAATCCTATATATGGAACTTACGATCGATCGCTGACTCCAACAAAGAATATTGGGCTTCCAGACTCTTTACTTTCTCGTTTCGATTTACTCTTCATTGTACTAGATCAAATGCATCCTGATATTGACCGGGACATATCAAAGCATGTGTTACGCATGCATCGTTATCGTTCTACAGTCGATGGAGGTGATGGAACTCATGATGCAAGCTCCAGATACGGAAGAGAAGAAGAAGCTGAGACTGACACATCTGTGTTTGTTAAATATAATAGAATGCTACATGGGAGAAAAACAGATCGGGGTAGGAAGCGTGATACACTTACTATTAAGTTTCTTAAGAAATACATTTATTACGCCAAGAACAGGATACAGCCTGACCTAACTGATGAGGCTTCTGAACACATTGCAACTGCTTATGCTGAGCTTAGAAATTCGAGTTCAAATGCAAAGACGGGAGGAACGCTTCCAATCACTGCCAGAACCTTAGAAACCATTATAAGACTCTCAACTGCTCATGCCAAATTAAAGTTAAGCAGAAAGGTTTCCAAATCTGATGTTGAAGCTGCTCTAAAAGTTTTAAATTTTGCAATATATCATAAAGAGTTGACTGAGATGGAGGAGCGTGAGGAAGAAAGAGACAGGGAAATGGAGAGAAAACGCCAAGCTGACAATCATGCTAGTGAAAGTAGTAGACCAGATCGTGGTACCAAAAGAAATGAAGTTTCAACTATGGATGCCATGGATTTCGATGATTTTCCCACCAGATCTCCAACCAGCCTATCTTCTGAAAGAATAGGAGAATTTAATACATTATTTGGTCAGCATATGCGCTCAAATCGCTTGGACCTCATATCTATTGATGAAATTGAGAATGTGCTCAATGGCTCAGCTGGTGTGCATTATACTAAGGCAGAGATAAAGTTACTACTAGAGAAATTGCAAGATGATAACAGAGTTATGATAGCTGATGGGGTGGTGCGAATGATAACATAG 2244 42.02 MDEIKALINHKSRRLIVNISDLHSFRDLGPRVLRNPSEYMQSFCDAVTEAARSIDQKYLKEGEQVLVGFEGPFVSRRVTPRELLSEFIGSMVCVEGIITKCSLVRPKVVKSVHFCPKTGSFTSREYRDITSNMGLPTGSVYPTRDESGNLLVTEYGLCKYKDHQALSMQEVPEISAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGIYKALPGKSKGCVNGVFRTVLIANNVSLLNKESNAPIYNPEDLKNIKKIAERDDAFELLGNSLAPSIYGHSWIKKAVILLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAILNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVIAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMHPDIDRDISKHVLRMHRYRSTVDGGDGTHDASSRYGREEEAETDTSVFVKYNRMLHGRKTDRGRKRDTLTIKFLKKYIYYAKNRIQPDLTDEASEHIATAYAELRNSSSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVSKSDVEAALKVLNFAIYHKELTEMEEREEERDREMERKRQADNHASESSRPDRGTKRNEVSTMDAMDFDDFPTRSPTSLSSERIGEFNTLFGQHMRSNRLDLISIDEIENVLNGSAGVHYTKAEIKLLLEKLQDDNRVMIADGVVRMIT 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10377170 10382113 + Bpe000805.1 Bpe01g00814 98062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00814 747 CDD MCM3 264 613 - -
Bpe01g00814 747 Pfam MCM AAA-lid domain 528 611 IPR041562 -
Bpe01g00814 747 Gene3D - 107 161 - -
Bpe01g00814 747 Gene3D - 81 211 IPR012340 -
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 414 426 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 362 376 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 302 317 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 390 403 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein family signature 441 449 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 ProSiteProfiles MCM family domain profile. 261 467 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 SMART mcm 76 615 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 Pfam MCM N-terminal domain 1 55 IPR027925 -
Bpe01g00814 747 ProSitePatterns MCM family signature. 370 378 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bpe01g00814 747 MobiDBLite consensus disorder prediction 621 662 - -
Bpe01g00814 747 PANTHER DNA HELICASE 1 739 - -
Bpe01g00814 747 Gene3D - 243 636 IPR027417 -
Bpe01g00814 747 SUPERFAMILY Nucleic acid-binding proteins 2 231 IPR012340 -
Bpe01g00814 747 Pfam MCM OB domain 81 211 IPR033762 -
Bpe01g00814 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 626 IPR027417 -
Bpe01g00814 747 SMART AAA_5 303 456 IPR003593 -
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 463 473 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 602 617 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 430 440 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 153 167 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Bpe01g00814 747 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 179 191 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Bpe01g00814 747 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 739 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 MobiDBLite consensus disorder prediction 621 678 - -
Bpe01g00814 747 Coils Coil 616 642 - -
Bpe01g00814 747 Pfam MCM P-loop domain 249 471 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe01g00814 747 Gene3D - 1 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00814 Bpe-Chr1:10377170 Bpe10g00498 Bpe-Chr10:12199940 2.97E-109 dispersed
Bpe01g00814 Bpe-Chr1:10377170 Bpe15g00852 Bpe-Chr15:18514200 9.28E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00814 K02541 - jre:108990186 1253.81