Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00862 ATGTCTTCGAAATCTGGAAGTAGTGGCCGAACGAGAGTCGGAAAGTATGAGCTGGGTCGCACTCTGGGCGAGGGTAATTTCGCGAAGGTGAAATTCGCTCGGAACATAGAGACGGGCGATAATGCGGCTATCAAAATCCTTGATAAGGAGAAAATTCTCAAGCACAAGATGATAGGCCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTGATGGCTAGCAGGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGACAAAATTGCCAGTAAAGGGAAATTAAAAGAAGATGAGGCAAGAAAGTACTTCCAGCAGCTTATTAATGCTGTGGATTATTGTCATAGCAGAGGTGTTTTTCATCGTGACTTAAAGCCTGAAAATTTGCTGCTAGATTCTAATGGAGTTCTTAAAGTTTCTGATTTTGGGTTGAGTGCTCTACCTCAGCAAGTTCGAGAAGACGGTCTGCTCCACACAACCTGTGGGACACCAAATTATGTTGCGCCTGAGGTAATCAATAACAAAGGCTATGACGGAGCACTAGCAGATTTGTGGTCATGTGGTGTGATTCTTTTTGTCTTAATGGCTGGTTATTTGCCCTTTGAAGATTCCAACCTTGCAGTATTGTATAAAAAGATACATAAGGCTGAGTTCACCTGTCCATCATGGTTTTCAACGAGTGGAAAGAAGTTAATAAAGCGGATTCTGGATCCCAACCCCTCAACTCGAATTACCATTGCTGAGGTTATTGAGAATGAATGGTTTAAGAAAGGATATAAGCCACCCATTTATGAACAAGCTGACGTTACTCTTGATGATGTTGATGCTATCTTCAATGAATCGGGAGATACACGTAACCTTGTTGTAGAGAGGAGAGAAGACGGCCCTGTGGCTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACATCTCAGGGCCTCAACCTTGGCTCACTTTTTGAAAAGCAAATGGGACTTGCCAAACGTGAAACAAGGTTCACATCCAACTGTCCTGCTAATGTGATCATTTCCAAGATTGAGGAAGCGGCAACTCCCTTGGGATTTGATGTGAAGAAAAATAACTTCAAGTTGAAACTTCAAGGAGGGAAAACTGGTCGTAAAGGTCATTTATCAGTTGCCACCGAGATTTATGAGGTTGCCCCTTCACTTTACATGGTCGAAGTTCGTAAAGCTGGAGGAGACACTTTAGAATTTCACAAGTTCTATAAGAACCTCTCCACTGGGCTGAAAGATATAGTATGGAAAACTGATGGTAGCATAGAGGAAGAAATTGGTGGCGCTGGTGTTGTACAATCTGGGTAA 1371 42.01 MSSKSGSSGRTRVGKYELGRTLGEGNFAKVKFARNIETGDNAAIKILDKEKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASRTKIYIVMEFVTGGELFDKIASKGKLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGALADLWSCGVILFVLMAGYLPFEDSNLAVLYKKIHKAEFTCPSWFSTSGKKLIKRILDPNPSTRITIAEVIENEWFKKGYKPPIYEQADVTLDDVDAIFNESGDTRNLVVERREDGPVAPVTMNAFELISTSQGLNLGSLFEKQMGLAKRETRFTSNCPANVIISKIEEAATPLGFDVKKNNFKLKLQGGKTGRKGHLSVATEIYEVAPSLYMVEVRKAGGDTLEFHKFYKNLSTGLKDIVWKTDGSIEEEIGGAGVVQSG 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17657866 17670750 + Bpe000868.1 Bpe01g00862 98110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00862 456 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00862 456 Gene3D Kinase associated domain 1, KA1 317 438 - -
Bpe01g00862 456 CDD STKc_SnRK3 15 270 - -
Bpe01g00862 456 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00862 456 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bpe01g00862 456 CDD CIPK_C 319 434 - -
Bpe01g00862 456 Gene3D Transferase(Phosphotransferase) domain 1 9 316 - -
Bpe01g00862 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bpe01g00862 456 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00862 456 Pfam NAF domain 315 375 IPR004041 GO:0007165
Bpe01g00862 456 PANTHER SERINE/THREONINE KINASE 10 443 - -
Bpe01g00862 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 443 - -
Bpe01g00862 456 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Bpe01g00862 456 SUPERFAMILY Protein kinase-like (PK-like) 13 282 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00862 Bpe-Chr1:17657866 Bpe11g00973 Bpe-Chr11:7228150 0 dispersed
Bpe02g01084 Bpe-Chr2:14011075 Bpe01g00862 Bpe-Chr1:17657866 5.54E-160 dispersed
Bpe02g01444 Bpe-Chr2:17839958 Bpe01g00862 Bpe-Chr1:17657866 2.00E-86 dispersed
Bpe04g00807 Bpe-Chr4:5312150 Bpe01g00862 Bpe-Chr1:17657866 5.54E-130 dispersed
Bpe14g00166 Bpe-Chr14:2059513 Bpe01g00862 Bpe-Chr1:17657866 9.09E-82 dispersed
Bpe01g00862 Bpe-Chr1:17657866 Bpe01g00869 Bpe-Chr1:18105500 3.75E-161 proximal
Bpe01g00675 Bpe-Chr1:4820344 Bpe01g00862 Bpe-Chr1:17657866 1.28E-144 transposed
Bpe01g00745 Bpe-Chr1:6620621 Bpe01g00862 Bpe-Chr1:17657866 0 transposed
Bpe05g00792 Bpe-Chr5:21266905 Bpe01g00862 Bpe-Chr1:17657866 6.72E-143 transposed
Bpe14g00496 Bpe-Chr14:4414015 Bpe01g00862 Bpe-Chr1:17657866 2.97E-180 transposed
Bpe14g00922 Bpe-Chr14:6876097 Bpe01g00862 Bpe-Chr1:17657866 0 transposed
Bpe14g00911 Bpe-Chr14:6827273 Bpe01g00862 Bpe-Chr1:17657866 2.08E-60 transposed
Bpe01g00862 Bpe-Chr1:17657866 Bpe08g00623 Bpe-Chr8:5144494 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63138 PF00069 Pkinase 5.30E-74 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00862 - - zju:107414012 794.653