Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00871 ACCTTCTCTCTCTCTCTAAGTATGGCAGGAATCAAGTTGTTTGGGAAGATGATCAAACTGCAGAATAAGAAAGAGAATGACGAGGAAACACCAGCTGATCCGACTGAAGAGAAGATGCCGGAAAAGATGATCCCATGTCCGAGATGCAAGAGTTATGAGACTAAATTTTGTTACTTCAACAACTACAATGTTAACCAGCCACGACATTTCTGCAAAGGTTGTCAGAGGTATTGGACAGCCGGGGGTGCCCTCCGCAACATTCCTATTGGCGCTGGTCGCCGGGAGAACAAGTCGCTTTGTGCCAACTTGAACCAGTTTCCTAAGAGTTATCTCCGTGGGCCGGCAGATTGGCCTTTTTCAACCTCACAAGAAGATTTCTACAAAGATTTGCCGGCGAAGCGCAGGAGAGTTGGTCAATTTATTGAAAACTTTTGA 435 45.75 TFSLSLSMAGIKLFGKMIKLQNKKENDEETPADPTEEKMPEKMIPCPRCKSYETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNIPIGAGRRENKSLCANLNQFPKSYLRGPADWPFSTSQEDFYKDLPAKRRRVGQFIENF 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18699815 18700249 + Bpe000881.1 Bpe01g00871 98119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00871 144 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Bpe01g00871 144 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Bpe01g00871 144 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 7 111 - -
Bpe01g00871 144 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Bpe01g00871 144 PANTHER CYCLIC DOF FACTOR 2 7 111 IPR045174 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00871 Bpe08g00766 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00871 Bpe-Chr1:18699815 Bpe08g00766 Bpe-Chr8:9450191 3.33E-66 dispersed
Bpe01g00871 Bpe-Chr1:18699815 Bpe08g00765 Bpe-Chr8:9430318 2.71E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20825 PF02701 zf-Dof 8.00E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00871 - - pper:18778392 160.614