Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00884 ATGGCAGCGAGTCTTACCCACCTTCAGCTCGCACGGGTTGCCTCCGACCACCATAAACTCAACTCCCAAGTCTCCGGCGTTTTATCGGATGATCTCGAGCATGTGCGTCTCCTTGATTCGAACGACGCGAATGATCATAATTTACAAAAACTTGAAGATGGAATGAAGAGGGTTCAGGTCAGAGTTTCCGGAATGACTTGTGCCGCATGCTCTAATTCTGTCGAGGGAGCTTTGAGGAGCATTAATGGAGTTTCTCGTGCTTCTGTTGCATTGCTTCAGAACAAGGCCGATGTGGTTTACAATCCTATTTGGGTTAAGGATGAAGAGATAAAGAACGCAATTGAAGATGCTGGATTCGAAGCAGAGATACTGCCTGAACCAAGTACTTTTGGAGCAAAACCTCATGGAACCCTGTTGGGGCAGTTCACTATAGGAGGGATGACATGTGCAGCATGTGTGAACTCTGTTGAAGGAATTTTGAGAAATCTTCCTGGTGTTAAGAAGGCAGTGGTAGCGTTAGCAACTTCTTTAGGGGAAGTTGAGTACGATCCCACTGTAATTAGTAAAGATGATATTGTGGAGGCAATAGAAGACGCAGGCTTTGAAGCTTCACTTGTACGCAGCAGCGAGCAGGATAAACTAATGCTTGGGGTTTCTGGTGTATTTTGTGAGATAGATGCACAATATTTGGAAGGCATTCTCATCAACCTGAATGGGGTGAGACAATTTCGTTTTGACAGGATATCAAGAGAATTGGAAATATTTTTTGACCCCGAGGTTGTCAGTTCTAGATCCTTAGTGGATGAGATTGAGGGAGGAAGCAATGGGAAGTTTACATTACATGTCTTAAGCCCCTATAGCAGAATGACTACCAAAGACGTCGCAGAAACCTCTACTATGTTTCGGCTATTCATATCCAGTTTGTTTCTTAGTATTCCAGTCTTTTTCATACGGGTAATTTGTCCGCACATTCCTCTATTGTACTCCTTGATACTCTGGAGATGTGGGCCTTTCCTTATGGGAGATTGGTTGAAGTGGGCTTTGGTGAGTGTAGTTCAATTTGTGATTGGAAAGCGATTTTATGTTGCAGCTTTTAGAGCTTTGCGAAATGGTTCAACTAACATGGATGTATTAGTTGCCTTGGGTACTTCAGCCTCTTACTTCTACTCTGTTTGTGCACTTCTATATGGAGCAGCTACTGGGTTTTGGTCTCCCACATACTTTGAAACAAGTTCCATGCTAATTACATTTGTATTGTTGGGAAAGTATTTGGAGTGTCTTGCTAAGGGGAAAACATCAGATGCCATCAAGAAGCTTGTAGAACTTGCCCCTGCAACTGCTTTATTGGTCGTGAAAGATAAAGATGGGAAATTGATTGAAGAAAGGTTAATAGATGCTTTGCTTATTCAGCCTGGTGACACATTGAAAGTTCTTCCCGGTGCAAAAATTCCAGCTGATGGTGTGGTTGTCTGGGGATCGAGTTATGTTAATGAGAGCATGGTAACGGGTGAATCTATACCTATTTTAAAGGAGCTCGACTCTCCCGTTGTTGGAGGTACAATTAATTTGCATGGTGCTCTTAATATAGAAGCAAAGAAAGTCGGGTCTGATACAGTTTTGAACCAGATCATTAGTCTGGTTGAGGCAGCACAGATGTCGAAAGCTCCGATTCAGAAATTTGCAGACTTTGTAGCAAGCATCTTTGTTCCAACGGTTGTTGCTATGGCATTATTTACGCTGTTGGGTTGGTATATTGGTGGGATTCTTGGAGCATACCCTAATAACTGGCTTCCTGAAAATGGAAACTACTTTGTCTTTGCGCTAATGTTTTCCATATCGGTTGTCGTGATTGCTTGTCCTTGTGCACTTGGTTTGGCCACACCAACTGCTGTCATGGTCGCAACTGGGGTTGGGGCTAATAACGGAGTGTTAATCAAAGGAGGAGATGCTTTAGAAAGAGCACAGAAAGTGAAATACGTGATATTTGATAAAACAGGCACTCTTACTCAGGGAAAGGCCTCTGTTACAACGGTCAAAGTCTTCACTGGAATGGATAGGGGAGCATTTCTCAAATTGGTGGCTTCTGCTGAGTCTAGCAGTGAACACCCGTTGGGGAAAGCTATAGTCGAATATGCAAGCCATTTCCATTTCTTTGATGACGCATCTGCAACCACGAAGTCTAACCACAGCACACTGCCTTCTGGATGGCTCTTTGATATCTCAAATTTCTCAGCTCTGCCGGGAAGAGGGGTTCAATGTTCTATTGATGGAAAATGGGTTTTGGTTGGTAACAGGAAGTTGATGAATGCCAGTGGAATAACAATAGCGCCTGATGTTGAGAATTATGTTGTTGAGCTGGAAGAAAGTGGAAAGACGGGGATACTTGTCGGGTACGATGGTAACTTGATCGGCTCTTTGGGAGTAGCAGACCCTTTAAAGAGAGAAGCTGCTGTGGTCATAGAGGGACTTAACAAAATGGGTGTCATTCCGATAATGGTTACCGGGGATAATTGGAGAACTGCTCGTGCTGTTGCAAAGGAGGTTGGTATTGGAGATGTAAGGGCAGAAGTAATGCCTGCAGGAAAGGCTGAAGTTATTCGCTCGTTCCAAAAGGATGGAAGCATAGTTGCTATGGTGGGCGATGGAATCAACGACTCTCCTGCTCTAGCTGCCGCTGATATTGGCATGGCAATCGGGGCAGGAACTGACGTCGCCATTGAAGCAGCCGATTATGTTTTGATGAGAAATAACTTGGAAGATGTAATCACAGCCATTGATCTTTCACGAAAGACATTTTCTCGGATCCGATTGAATTACATGTTTGCCATGGCCTATAACGTGATTGCGATTCCAATAGCAGCAGGAGTATTTTACCCGTCCTTAGGGATAGAGTTGCCGCCGTGGGCTGCAGGTGCGTGCATGGCTCTATCGTCGGTGAGTGTTGTGTGCTCTTCTTTGCTTCTAAGGAGATACAAAAAACCCAGACTTACGACTTTACTAGAAATAACTGTAGAATAG 3018 43.97 MAASLTHLQLARVASDHHKLNSQVSGVLSDDLEHVRLLDSNDANDHNLQKLEDGMKRVQVRVSGMTCAACSNSVEGALRSINGVSRASVALLQNKADVVYNPIWVKDEEIKNAIEDAGFEAEILPEPSTFGAKPHGTLLGQFTIGGMTCAACVNSVEGILRNLPGVKKAVVALATSLGEVEYDPTVISKDDIVEAIEDAGFEASLVRSSEQDKLMLGVSGVFCEIDAQYLEGILINLNGVRQFRFDRISRELEIFFDPEVVSSRSLVDEIEGGSNGKFTLHVLSPYSRMTTKDVAETSTMFRLFISSLFLSIPVFFIRVICPHIPLLYSLILWRCGPFLMGDWLKWALVSVVQFVIGKRFYVAAFRALRNGSTNMDVLVALGTSASYFYSVCALLYGAATGFWSPTYFETSSMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKDGKLIEERLIDALLIQPGDTLKVLPGAKIPADGVVVWGSSYVNESMVTGESIPILKELDSPVVGGTINLHGALNIEAKKVGSDTVLNQIISLVEAAQMSKAPIQKFADFVASIFVPTVVAMALFTLLGWYIGGILGAYPNNWLPENGNYFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKVKYVIFDKTGTLTQGKASVTTVKVFTGMDRGAFLKLVASAESSSEHPLGKAIVEYASHFHFFDDASATTKSNHSTLPSGWLFDISNFSALPGRGVQCSIDGKWVLVGNRKLMNASGITIAPDVENYVVELEESGKTGILVGYDGNLIGSLGVADPLKREAAVVIEGLNKMGVIPIMVTGDNWRTARAVAKEVGIGDVRAEVMPAGKAEVIRSFQKDGSIVAMVGDGINDSPALAAADIGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYMFAMAYNVIAIPIAAGVFYPSLGIELPPWAAGACMALSSVSVVCSSLLLRRYKKPRLTTLLEITVE 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19315408 19320849 - Bpe000893.1 Bpe01g00884 98132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00884 1005 ProSiteProfiles Heavy-metal-associated domain profile. 213 271 IPR006121 GO:0046872
Bpe01g00884 1005 TIGRFAM TIGR00003: copper ion binding protein 58 121 IPR006122 GO:0005507
Bpe01g00884 1005 TIGRFAM TIGR00003: copper ion binding protein 141 203 IPR006122 GO:0005507
Bpe01g00884 1005 SFLD C1.7: P-type atpase like 643 931 - -
Bpe01g00884 1005 PANTHER HEAVY METAL P-TYPE ATPASE 24 998 - -
Bpe01g00884 1005 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 375 988 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bpe01g00884 1005 SUPERFAMILY Calcium ATPase, transmembrane domain M 394 952 IPR023298 -
Bpe01g00884 1005 Pfam haloacid dehalogenase-like hydrolase 657 893 - -
Bpe01g00884 1005 Gene3D - 628 936 IPR023214 -
Bpe01g00884 1005 CDD HMA 59 122 IPR006121 GO:0046872
Bpe01g00884 1005 Gene3D - 55 126 - -
Bpe01g00884 1005 PRINTS H+-transporting ATPase (proton pump) signature 851 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe01g00884 1005 PRINTS H+-transporting ATPase (proton pump) signature 879 895 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe01g00884 1005 PRINTS H+-transporting ATPase (proton pump) signature 910 935 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe01g00884 1005 SUPERFAMILY HAD-like 660 985 IPR036412 -
Bpe01g00884 1005 ProSitePatterns Heavy-metal-associated domain. 144 173 IPR017969 GO:0046872
Bpe01g00884 1005 SUPERFAMILY HMA, heavy metal-associated domain 212 272 IPR036163 GO:0046872
Bpe01g00884 1005 SUPERFAMILY HMA, heavy metal-associated domain 52 127 IPR036163 GO:0046872
Bpe01g00884 1005 CDD P-type_ATPase_Cu-like 302 975 - -
Bpe01g00884 1005 Gene3D - 760 810 IPR023299 GO:0000166
Bpe01g00884 1005 Gene3D - 668 759 IPR023299 GO:0000166
Bpe01g00884 1005 PANTHER ATP7, ISOFORM B 24 998 - -
Bpe01g00884 1005 Pfam E1-E2 ATPase 442 640 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 804 815 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 826 836 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 902 914 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 879 898 - -
Bpe01g00884 1005 PRINTS P-type cation-transporting ATPase superfamily signature 661 675 - -
Bpe01g00884 1005 CDD HMA 141 204 IPR006121 GO:0046872
Bpe01g00884 1005 SUPERFAMILY Calcium ATPase, transduction domain A 462 547 IPR008250 -
Bpe01g00884 1005 Pfam Heavy-metal-associated domain 142 202 IPR006121 GO:0046872
Bpe01g00884 1005 Pfam Heavy-metal-associated domain 60 120 IPR006121 GO:0046872
Bpe01g00884 1005 ProSitePatterns E1-E2 ATPases phosphorylation site. 663 669 IPR018303 -
Bpe01g00884 1005 SFLD p-type atpase 643 931 IPR044492 -
Bpe01g00884 1005 SUPERFAMILY HMA, heavy metal-associated domain 140 208 IPR036163 GO:0046872
Bpe01g00884 1005 Gene3D - 140 206 - -
Bpe01g00884 1005 ProSiteProfiles Heavy-metal-associated domain profile. 139 205 IPR006121 GO:0046872
Bpe01g00884 1005 ProSiteProfiles Heavy-metal-associated domain profile. 57 123 IPR006121 GO:0046872
Bpe01g00884 1005 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 414 682 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe01g00884 1005 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 779 959 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe01g00884 1005 ProSitePatterns Heavy-metal-associated domain. 62 92 IPR017969 GO:0046872
Bpe01g00884 1005 Gene3D - 429 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00884 Bpe-Chr1:19315408 Bpe08g01488 Bpe-Chr8:15588049 0 dispersed
Bpe01g00884 Bpe-Chr1:19315408 Bpe08g00778 Bpe-Chr8:9667587 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00884 K17686 - jre:118345052 1603.96