Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00007 | ATGGCTGACCCTTACTCCAATCTCCTTACTGGTCTCTTCAAGCTCAATACAGTCCACCATACCCAACCTTCTCCTTTTCCAAACCCTCCGCCGCCGCCTCTTTTCTCCCAACCCTTTTTCCACCACCAAACTCCGCCGCCTTCTCCCCCTCTCAGGCAGGCCCTCCCCCTCCTCAGCCTCACCCCACTCAACCAACAACATCAACAACAACAAGATCAATTTCACCGCTCTTCCTCTACCGCCATGGAAGTGGATCAGAAAAGCTTCAAACAGAAAGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGACGATGACATGGCTTCTGTAACCGTTGCCCTTCATATAGGTTTACCTAGCCCTAGTTCAGCTGAGCTTGCTTCTATTCTCTCTGCTTCTTCATCTGAAATCACTGATCTTAAAGATCATGGAGACGGAGATGATTTAGGGTACCCTATAAACAGGCTAAACAAGGGTCAGTATTGGATCCCTACTCCATCTCAGATTCTCATCGGTCCTACCCAGTTTTCTTGCCCTGTTTGCTGTAAGACCTTCAACAGATATAATAACATGCAGATGCATATGTGGGGCCATGGATCTCAATATAGAAGAGGGCCAGAATCACTGAGAGGTACACAACCAACAGGAATGCTAAGGCTTCCTTGCTACTGCTGTGCAACGGGATGCAGAAACAACATAGACCATCCGAGGGCTAAACCACTGAAAGATTTTAGAACCCTCCAAACACATTACAAAAGAAAGCACGGAATCAAGCCTTTTATGTGTAGAAAATGTGGGAAAGCCTTTGCAGTGAAAGGAGACTGGAGAACTCATGAGAAAAACTGTGGGAAACTTTGGTATTGTATCTGCGGGTCTGATTTTAAGCACAAGAGGTCTCTTAAAGATCATATAAAAGCTTTTGGCAAAGAGCATGCAGCTTATGGAATCGATGGGTTTGAAGAAGATGATGAACCGGCCTCTGAGGTTGAACAAGATAATGAATCT | 1002 | 45.61 | MADPYSNLLTGLFKLNTVHHTQPSPFPNPPPPPLFSQPFFHHQTPPPSPPLRQALPLLSLTPLNQQHQQQQDQFHRSSSTAMEVDQKSFKQKEEEEEEEEEEDDDMASVTVALHIGLPSPSSAELASILSASSSEITDLKDHGDGDDLGYPINRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCATGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVKGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGKEHAAYGIDGFEEDDEPASEVEQDNES | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 71469 | 73335 | + | Bpe025041 | Bpe02g00007 | 98156 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00007 | 334 | SMART | c2h2final6 | 259 | 279 | IPR013087 | - | |
Bpe02g00007 | 334 | SMART | c2h2final6 | 175 | 197 | IPR013087 | - | |
Bpe02g00007 | 334 | MobiDBLite | consensus disorder prediction | 23 | 53 | - | - | |
Bpe02g00007 | 334 | MobiDBLite | consensus disorder prediction | 58 | 85 | - | - | |
Bpe02g00007 | 334 | PANTHER | ZINC FINGER PROTEIN WIP2 | 1 | 334 | IPR043584 | GO:0003700|GO:0010468 | |
Bpe02g00007 | 334 | PANTHER | TESTA 1 PROTEIN, PUTATIVE-RELATED | 1 | 334 | - | - | |
Bpe02g00007 | 334 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 177 | 197 | IPR013087 | - | |
Bpe02g00007 | 334 | Gene3D | Classic Zinc Finger | 174 | 197 | - | - | |
Bpe02g00007 | 334 | SUPERFAMILY | beta-beta-alpha zinc fingers | 171 | 197 | IPR036236 | - | |
Bpe02g00007 | 334 | SUPERFAMILY | beta-beta-alpha zinc fingers | 241 | 279 | IPR036236 | - | |
Bpe02g00007 | 334 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 175 | 202 | IPR013087 | - | |
Bpe02g00007 | 334 | Coils | Coil | 82 | 102 | - | - | |
Bpe02g00007 | 334 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 259 | 279 | IPR013087 | - | |
Bpe02g00007 | 334 | MobiDBLite | consensus disorder prediction | 18 | 106 | - | - | |
Bpe02g00007 | 334 | Gene3D | Classic Zinc Finger | 237 | 314 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00007 | Bpe-Chr2:71469 | Bpe06g00633 | Bpe-Chr6:17106550 | 4.49E-129 | dispersed | |
Bpe13g01331 | Bpe-Chr13:18557497 | Bpe02g00007 | Bpe-Chr2:71469 | 1.16E-99 | transposed | |
Bpe02g00007 | Bpe-Chr2:71469 | Bpe04g00552 | Bpe-Chr4:3498947 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20827 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00007 | - | - | jre:108986074 | 477.633 |