Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00019 | ATGCAGTCTACTAACTCAGAGCTTCACATGTCGACGCCGGGACGACAGTCAATGCAAAGCTTTTGCAGTTCTTCGTCGTATCACCCTCTTCATGTTTCTGTAATTTCAGAGACTACTCAATCTCCCCAGAGGAGAGCTCTTGCTGCTCTTAGGAACCATAAGGAGGCCGAGAGGAGGAGGAGACAGAATATCAACTCTCATCTCAATAAGCTTCGTAATCTTCTTCCTTGTAATTCTAAGACCGACAAAGCTTCTCTTCTTGCAAAAGTTGTTCAACGCGTGAAAGAGTTAAAGCAACAAGCCTCTGAAATAGCTGGGATCGAGAGTTTCCCTTCCGACACAGACGAAATCTCGGTGTCGTCCGGATGTTTTTCCGGCGACGGGAGATTGATTTATAAAGCCTCTTTGTGCTGTGACGACCGATCAGACGTAATAGCGGACCTCATCGAAATCCTAAACTCTCTCCACTTAAAAACTCTCAGAGCTGAAATGGCAACTCTCGGAGGGAGGACACGAAAGGTTCTCATTGTCGCTGCCGATAAAGATCACGGCATCGAATCCGTTAATTTCCTTGAAAATGCATTAAAGTCTTTGGTCGAACGCTCAGATTCCACCGACAGATCCAAGAGAAGACAGTGTTTCGCTCGCAACGCAGCATCTAATAATTGA | 669 | 45.89 | MQSTNSELHMSTPGRQSMQSFCSSSSYHPLHVSVISETTQSPQRRALAALRNHKEAERRRRQNINSHLNKLRNLLPCNSKTDKASLLAKVVQRVKELKQQASEIAGIESFPSDTDEISVSSGCFSGDGRLIYKASLCCDDRSDVIADLIEILNSLHLKTLRAEMATLGGRTRKVLIVAADKDHGIESVNFLENALKSLVERSDSTDRSKRRQCFARNAASNN | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 186149 | 187156 | + | Bpe007881.1 | Bpe02g00019 | 98168 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00019 | 222 | CDD | bHLH_AtAIG1_like | 45 | 121 | - | - | |
Bpe02g00019 | 222 | Pfam | Helix-loop-helix DNA-binding domain | 52 | 97 | IPR011598 | GO:0046983 | |
Bpe02g00019 | 222 | PANTHER | TRANSCRIPTION FACTOR BHLH106-RELATED | 14 | 216 | - | - | |
Bpe02g00019 | 222 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 51 | 104 | IPR036638 | GO:0046983 | |
Bpe02g00019 | 222 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 14 | 216 | IPR045847 | GO:0003700|GO:0006355 | |
Bpe02g00019 | 222 | SMART | finulus | 54 | 103 | IPR011598 | GO:0046983 | |
Bpe02g00019 | 222 | Coils | Coil | 54 | 74 | - | - | |
Bpe02g00019 | 222 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bpe02g00019 | 222 | Gene3D | - | 44 | 106 | IPR036638 | GO:0046983 | |
Bpe02g00019 | 222 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 97 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00019 | Bpe-Chr2:186149 | Bpe10g00926 | Bpe-Chr10:14860690 | 6.67E-46 | dispersed | |
Bpe02g01095 | Bpe-Chr2:14569522 | Bpe02g00019 | Bpe-Chr2:186149 | 6.03E-35 | transposed | |
Bpe02g00019 | Bpe-Chr2:186149 | Bpe04g00598 | Bpe-Chr4:3813447 | 1.39E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20831 | PF00010 | HLH | 3.00E-11 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00019 | - | K22484 | qsu:111998080 | 287.345 |