Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00023 TTATGGTCTGGGTTTTTATGGTCGTGTGAAAAAACAGGTGAGGCAGCCATTGCTGGAGTTAAGGAGGAGGAGAAGAAGATGGGTGCAGCTTTAGCGGATGAAAAGAACCGAAAAGTTCTGGGAGATATCGGAAATCTTGTGACAGTTCGAGGAATGGACCCAAAGCCTAATCGTCCCATCACAAGAAGCTTCTGCGCCCAACTGCTTGCTAATGCTCAAGCTGCTGCAGCTGCTGAAAACAATAATAAGAAACAATTGGTGGTTGAGGCTAAGGATGTGGCGGCAGCGGGGAAAAAAGCAGGACTAGTTCCAAAGCCAACTCAGCAGAAACAACAAAATCCAGTCGCCGTGATTGGAATAAGCCCAGATTCAGGCTCAGAAGTGAATAAATCGGAGAGTAAAAAGGAAGGAGAAGAAGTCTCGTCGAAGAAGAAACAGAAGTCTACCCGTACTTTGACTTCAGTCCTCACAGCCAGAAGCAAGGCTGCTTGTGGTGTGACAAACAAACCCAAGCAAGAGAACTGTGATATAGATTCAGCTGATGCAGGAAACGAGTTTGCAGCAGTGGAATATATTGACGACATGTACAAGTTCTACAAGCTTGTTGAGCATGAAAGCAGGCCTCGTGATTATATGGATTCACAGCCGGAGATCAATTCTCAAATGAGATCTATTCTGGTGGATTGGCTGGTTGATGTTCATAACAGATTTGAACTTTCCCCCGAGACATTCTACCTCACAATCAACATCGTCGATCGATATCTCGCGGCCAAGAAGGTGATGAGGAAAGAACTGCAGTTGGTTGGTATAAGTGCAATGCTGATGGCCTCAAAATACGAAGAAATCTGGGCTCCTGAGGTGGATGACTTTGTCTGTCTTTCGGATAGAGCTTACTCCCATGAACAGATCTTGAAGATGGAGAAACAAATTCTAGGAAAACTTGAATGGACGTTGACAGTTCCTACGCCTTATGTGTTTCTTGTTCGATTCATCAAGGCCTCTAAAGATGCCGATTCAGAAATGGAGAACATGGTTTATTTTCTAGCTGAACTGGGAATGATGCATTATTCAGCTGTGATAATGTACAGCCCATCAATGATTGCTGCCTCAGCAGTCTACGCTGCTCGATGTACTCTGAACAAGAAATCTGCTTGGACTGAAACTCTGAAATATCATTCCGGTTTTTCGAAATCACAGCTCATCGATTGTGGGAAATTGTTGGTGTCCTTCCATGCAATGGCGAAGGAGAGTCGACTGCAGGTTGTGAGGAAGAAGTACTCTGCTTCAGAAAGAGGAGCTGTGGCTTTGCTTCCACCGGCCGAGAAATTGGTGTCCGCTAAGCTTGCTGCTGCT 1353 45.23 LWSGFLWSCEKTGEAAIAGVKEEEKKMGAALADEKNRKVLGDIGNLVTVRGMDPKPNRPITRSFCAQLLANAQAAAAAENNNKKQLVVEAKDVAAAGKKAGLVPKPTQQKQQNPVAVIGISPDSGSEVNKSESKKEGEEVSSKKKQKSTRTLTSVLTARSKAACGVTNKPKQENCDIDSADAGNEFAAVEYIDDMYKFYKLVEHESRPRDYMDSQPEINSQMRSILVDWLVDVHNRFELSPETFYLTINIVDRYLAAKKVMRKELQLVGISAMLMASKYEEIWAPEVDDFVCLSDRAYSHEQILKMEKQILGKLEWTLTVPTPYVFLVRFIKASKDADSEMENMVYFLAELGMMHYSAVIMYSPSMIAASAVYAARCTLNKKSAWTETLKYHSGFSKSQLIDCGKLLVSFHAMAKESRLQVVRKKYSASERGAVALLPPAEKLVSAKLAAA 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 208686 210531 + Bpe025044 Bpe02g00023 98172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00023 451 Coils Coil 69 89 - -
Bpe02g00023 451 PANTHER CYCLINS 24 444 IPR039361 -
Bpe02g00023 451 Pfam Cyclin, C-terminal domain 321 439 IPR004367 -
Bpe02g00023 451 SMART cyclin_7 325 409 IPR013763 -
Bpe02g00023 451 SMART cyclin_7 228 312 IPR013763 -
Bpe02g00023 451 MobiDBLite consensus disorder prediction 105 127 - -
Bpe02g00023 451 CDD CYCLIN 319 408 IPR013763 -
Bpe02g00023 451 SUPERFAMILY Cyclin-like 320 441 IPR036915 -
Bpe02g00023 451 SUPERFAMILY Cyclin-like 184 318 IPR036915 -
Bpe02g00023 451 Gene3D - 313 448 - -
Bpe02g00023 451 MobiDBLite consensus disorder prediction 101 153 - -
Bpe02g00023 451 ProSitePatterns Cyclins signature. 223 254 IPR006671 -
Bpe02g00023 451 Gene3D - 208 312 - -
Bpe02g00023 451 Pfam Cyclin, N-terminal domain 194 318 IPR006671 -
Bpe02g00023 451 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 24 444 - -
Bpe02g00023 451 PIRSF Cyclin_A_B_D_E 7 451 IPR039361 -
Bpe02g00023 451 SMART Cyclin_C_2 321 440 IPR004367 -
Bpe02g00023 451 MobiDBLite consensus disorder prediction 128 146 - -
Bpe02g00023 451 CDD CYCLIN 222 311 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00023 Bpe02g01650 CCT
Bpe02g00023 Bpe14g00391 CCT
Bpe02g00023 Bpe04g00534 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00023 Bpe-Chr2:208686 Bpe04g00043 Bpe-Chr4:416855 1.99E-53 dispersed
Bpe01g00337 Bpe-Chr1:2116089 Bpe02g00023 Bpe-Chr2:208686 2.03E-127 transposed
Bpe02g00310 Bpe-Chr2:2043718 Bpe02g00023 Bpe-Chr2:208686 1.75E-80 transposed
Bpe15g00922 Bpe-Chr15:19000299 Bpe02g00023 Bpe-Chr2:208686 2.49E-67 transposed
Bpe02g00023 Bpe-Chr2:208686 Bpe04g00534 Bpe-Chr4:3391110 8.24E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00023 K21777 - csv:101217210 530.406