Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00072 ATGGACAGTTCAATGCTAACCAAGCTCAAACCTTACATAGCTATAGTTTCGGTCCAGTTCGGTTACGCAGGGATGAACATCATTACCATGCTTTCATTCAAACACGGCATGAGTCATTACATACTTGCTGTTTACCGCCATGCTATTGCCACCCTCGTGATTGCTCCTTTTGCTATCTTTCTCGAAAGGAAGACAAGACCAAAGATGACTCTACCGATCTTTTTAAGGATAATGCTTCTGGCTTTCCTCGAGCCTGTACTTGATCAAAACCTGTACTACGTGGGAATGAAGTATACCTCAGCGACCTTTGCATCAGCCATTGTCAATGTCCTCCCTGCAATTACCTTCATCATGGCAATCGTTTTCAGGCTGGAGAGTGTGAACTTGAAGAAGATAGAGAGCATGGCAAAGATTGGCGGAACGGCAGTGACGTTGACCGGAGCCATGATAATGACGATGTACAGAGGGCCTCTCGTTGACATCATACACGGGCATGGGGGTGGCGGAAGATACCCTGCCGCCTCCGGTCAATCGAACTCAGACCAGCATTGGGTCACTGGCACTCTCATGCTCTTGTGCAGTTGTTGTGGCTGGTCTGCATTCTTCATTTTGCAATCATTTACGTTGGAGAAGTACCCGGCCGAGCTATCGCTGAGCGGATGGATTTGCCTGATGGGGATGGCTGAAGGGGCGGCGGTTTCGCTCGTGATGGAACGAGACATGAGCATCTGGGTTCTCGGCTGGGATTCGAGACTTGTTGCTGCTGCTTACACTGGAGTGGTCTGCTCAGGCATTGCATACTACTTACAGGGAGTGGTAATCAAAGAGAAAGGCCCAGTGTTTGTGACCTCTTTCAGCCCTCTCATCATGATCATCACAGCCGCTCTGGGCTCCATCATCCTGGCCGAGAAGATCCATCTTGGAAGCATAATTGGAGCCATTCTGATAGTGATGGGGCTGTACACAGTAGTGTGGGGCAAAAGCAAAGACCGGCAAAACAGCGGCAACAAGAGTTTAGAGGGCGCGAAGAGTGGCGCTGAGTTGCCCATCACTCGCACCAACAAACCTGCCTTTCCTGCAGCTCACTGCAATCACGTCGACGCCATTTCAGTGCCAACTGCTATCGCCTCTGGCTGA 1137 50.31 MDSSMLTKLKPYIAIVSVQFGYAGMNIITMLSFKHGMSHYILAVYRHAIATLVIAPFAIFLERKTRPKMTLPIFLRIMLLAFLEPVLDQNLYYVGMKYTSATFASAIVNVLPAITFIMAIVFRLESVNLKKIESMAKIGGTAVTLTGAMIMTMYRGPLVDIIHGHGGGGRYPAASGQSNSDQHWVTGTLMLLCSCCGWSAFFILQSFTLEKYPAELSLSGWICLMGMAEGAAVSLVMERDMSIWVLGWDSRLVAAAYTGVVCSGIAYYLQGVVIKEKGPVFVTSFSPLIMIITAALGSIILAEKIHLGSIIGAILIVMGLYTVVWGKSKDRQNSGNKSLEGAKSGAELPITRTNKPAFPAAHCNHVDAISVPTAIASG 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 562039 563688 - Bpe007924.1 Bpe02g00072 98221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00072 378 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Bpe02g00072 378 Pfam EamA-like transporter family 14 135 IPR000620 GO:0016020|GO:0016021
Bpe02g00072 378 PANTHER WAT1-RELATED PROTEIN 7 342 IPR030184 GO:0016021|GO:0022857
Bpe02g00072 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Bpe02g00072 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
Bpe02g00072 378 PANTHER WAT1-RELATED PROTEIN 7 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00072 Bpe-Chr2:562039 Bpe15g01004 Bpe-Chr15:19548795 7.33E-127 dispersed
Bpe10g00249 Bpe-Chr10:9250941 Bpe02g00072 Bpe-Chr2:562039 5.80E-79 dispersed
Bpe14g00444 Bpe-Chr14:4067341 Bpe02g00072 Bpe-Chr2:562039 1.47E-69 dispersed
Bpe14g00378 Bpe-Chr14:3578482 Bpe02g00072 Bpe-Chr2:562039 4.74E-136 wgd
Bpe02g00072 Bpe-Chr2:562039 Bpe02g01110 Bpe-Chr2:14747203 2.24E-81 wgd
Bpe02g00072 Bpe-Chr2:562039 Bpe04g00487 Bpe-Chr4:3063383 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00072 - - peu:105127817 511.146