Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00078 ATGTCTGCAACAATGGAGAAGGCTAGAAACCAGAGAAAATCCACGAAGAAAGTGCAACAAAATCAAAATTCCCCACCGCAGAAGACAGAAAAACCACCACCTTGGTCGGTGGTAAGGGGCCTGTTGAGCTGTAGATATCTCCAACCACAGCAACAGCCTCTGCAAATGGCGATAAAAGTGCAACAGAAGCTCAAACCAGATAAACCCATCGAGGAGGACGTCAAGAAATGCAAGAAAACGAGATGGTCCAGTTCACTTTGTAGCAACACAAAGATAACGCAGAGACCCGATCAAACTGGGTTTCCTCAAGTCCATGAGAAAAGGACTTCCTTCAGCGTAGGAAAAGATGAATACTCTTCGAGCAGATCCATGAAAGCTCCTCTGCGTGAACTAAATGGGGTTGTGATTTCTACTTCTTATTTATCAGCGTCCTCAAACTCGTCCAATGGCGGCTCTTCTAGATCGGGGAAGTCTTTCCGGAAGTTCTACGGCTGTTACGAATGTAAGATGGTCGTTAATCCTGTTCTTGGAATCATCAGAGATCCTTCTCTCAGGGCTAGTATTTTGCCTTGCCCTGAATGCGGGGAAATCTTCATCAAATCTGAAAGTTTGGAGCTTCATCAATCTACTAGCCATGCAGTTTCCGAACTGGGTGCTGAGGATACAAGCAGGAACATAGTGGAAATCATATTCCAGTCGAGCTGGGTGAAGAAACAAGCTCCCGTATGCAAAATCGACCGTATACTAAAAGTCCACAACACCCAAAAGACCATCTGCAGATTCGAAGAGTACAGAGACGCCATTAAAGCCAAATCAGCGAAGCTTCCAAAGAAGTACCCACGTTGCATAGCAGACGGCAATGAGCTACTCAGATTCCACTCAACCACCGTGGCCTGCTCACTCGGAGAAAACGGTTCATCAAATCTCTGCCACGCAATCACGGAGTGCAACGTCTGTAGCATCATAAAGAACGGCTTCAAAGTTTCCACCGGAGAACAGCCAGAAAAGGGAGTTCTGACGACGGCGACGAGTGGGAAAGCCCATGACAGTGCAGGAGATTGTCCGGACGGCGATGGGCGGAGGGCGATGCTGGTTTGCAGGGTGATTGCCGGGAGAGTAAGGAGGGGCTTGGAAATGAGTTCAGAAGAGTACGATTCAGTGGGGGGAGCAGTGGAAGTGTATTCCAGTCTGGAAGAGTTGCGTGTATTCAATCCAAAAGCTATTTTGCCTTGTTTTGTTGTCATTTATGGAGGATTT 1257 47.33 MSATMEKARNQRKSTKKVQQNQNSPPQKTEKPPPWSVVRGLLSCRYLQPQQQPLQMAIKVQQKLKPDKPIEEDVKKCKKTRWSSSLCSNTKITQRPDQTGFPQVHEKRTSFSVGKDEYSSSRSMKAPLRELNGVVISTSYLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVNPVLGIIRDPSLRASILPCPECGEIFIKSESLELHQSTSHAVSELGAEDTSRNIVEIIFQSSWVKKQAPVCKIDRILKVHNTQKTICRFEEYRDAIKAKSAKLPKKYPRCIADGNELLRFHSTTVACSLGENGSSNLCHAITECNVCSIIKNGFKVSTGEQPEKGVLTTATSGKAHDSAGDCPDGDGRRAMLVCRVIAGRVRRGLEMSSEEYDSVGGAVEVYSSLEELRVFNPKAILPCFVVIYGGF 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 591296 592621 - Bpe025057 Bpe02g00078 98227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00078 419 MobiDBLite consensus disorder prediction 1 35 - -
Bpe02g00078 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 416 - -
Bpe02g00078 419 SUPERFAMILY ADP-ribosylation 214 417 - -
Bpe02g00078 419 ProSitePatterns Zinc finger C2H2 type domain signature. 191 212 IPR013087 -
Bpe02g00078 419 Gene3D - 213 417 - -
Bpe02g00078 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 189 217 IPR013087 -
Bpe02g00078 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 416 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00078 Bpe02g01625 CCT
Bpe02g00078 Bpe04g00477 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00078 Bpe-Chr2:591296 Bpe04g00246 Bpe-Chr4:1648146 1.15E-95 dispersed
Bpe11g00264 Bpe-Chr11:1917019 Bpe02g00078 Bpe-Chr2:591296 3.88E-34 dispersed
Bpe02g00078 Bpe-Chr2:591296 Bpe02g01625 Bpe-Chr2:19116278 1.36E-129 wgd
Bpe02g00078 Bpe-Chr2:591296 Bpe04g00477 Bpe-Chr4:3012432 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20838 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00078 - - zju:107421015 553.903