Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00088 ATGAGCAATTTGAGGGCAATCTGTAGGCCATACACGTTGTTCTCCTCTTTCATATTTAGCAGCAGCAGACAGCAAGTTCGGTCGAGGGTTGCGTTTCGAAACCCCCATTACCATCCTCGGTTCGATTCTTTTTCCAGCGGGTTCTATATGGCTGACCGGTGGTTCAGTGTTCATCAGAGGAGGACGCTTGTTCAAGCTTCGAAATGGAGTGACCAGAAAACTCCCTACGAAACTCTTGAGCTAGAAAGAGATGCTGATGAGGAGCAGATAAAGGTAGCTTACAGGCGATTGGCCAAATTTTATCATCCAGATGTCTATGATGGTAGAGGAACACTTGAGGAAGGTGAAACTGCTGAAGCAAGATTCATTAAGATTCAAGCAGCCTATGAGTTGCTCATAGATGAAGAGAAGAGGAGTCAATATGATATAGATAATCGAGTTAACCCAATGAAGGCTTCTCAAGCATGGATGGAGTGGCTTATAAAAAAGCGAAAAGCTTTTGATCAGCGTGGTGATATGGCGATAGCAGCTTGGGCAGAACAGCAGCAGCGTGAGTTAAATCTCCGCGTACGGCGCCTTTCTCGATCAAAGGTAATTGATCCTGATGAAGAAAGAAGAATCCTAGCAAAGGAGAAAAAGGCGTCAGCTGAGTATTTTAACAGTACGCTGAAGAGGCATACACTTATCCTAAAGAAGAGGGACCTGATGAGGAAGAGAGCAGAGGAGGACAAGAAAAAGGTCATAAGTCAGCTATTAGCTGCAGAGGGACTCGAGCTGGATCCAGACGACGAGGGAGGCTCCTAA 804 45.65 MSNLRAICRPYTLFSSFIFSSSRQQVRSRVAFRNPHYHPRFDSFSSGFYMADRWFSVHQRRTLVQASKWSDQKTPYETLELERDADEEQIKVAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDEEKRSQYDIDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRRLSRSKVIDPDEERRILAKEKKASAEYFNSTLKRHTLILKKRDLMRKRAEEDKKKVISQLLAAEGLELDPDDEGGS 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 663871 665931 - Bpe007939.1 Bpe02g00088 98237

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00088 267 PANTHER CO-CHAPERONE PROTEIN DJLA 38 263 - -
Bpe02g00088 267 Gene3D DnaJ domain 59 158 IPR036869 -
Bpe02g00088 267 PANTHER LD30543P 38 263 - -
Bpe02g00088 267 SUPERFAMILY Chaperone J-domain 20 141 IPR036869 -
Bpe02g00088 267 SMART dnaj_3 73 137 IPR001623 -
Bpe02g00088 267 PRINTS DnaJ domain signature 76 94 IPR001623 -
Bpe02g00088 267 PRINTS DnaJ domain signature 117 137 IPR001623 -
Bpe02g00088 267 PRINTS DnaJ domain signature 163 182 IPR001623 -
Bpe02g00088 267 PRINTS DnaJ domain signature 94 109 IPR001623 -
Bpe02g00088 267 CDD DnaJ 74 134 IPR001623 -
Bpe02g00088 267 Coils Coil 76 96 - -
Bpe02g00088 267 ProSiteProfiles dnaJ domain profile. 74 145 IPR001623 -
Bpe02g00088 267 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Bpe02g00088 267 Pfam DnaJ domain 75 142 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00088 - - - qsu:112023231 406.757
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00088 Bpe-Chr2:663871 Bpe06g00082 Bpe-Chr6:1136305 9.70E-11 dispersed
Bpe02g00088 Bpe-Chr2:663871 Bpe10g00064 Bpe-Chr10:908157 4.25E-11 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g345 . . . . Bpe02g00088 . . Bma01g02630 . . . . . . Sed04g0058 . . Bhi04g00721 Tan02g2350 Cmetu03g2083 . . . . Cla08g01081 Cam08g1532 Cec08g1108 Cco08g1235 Clacu08g1237 . Cre08g1018 . . . . . . . Cme03g01491 . . Bda11g00754 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi08g00937 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005322 1 1 0 1 1 3 1 3 1 1 2 3 1 1 1 1 3 2 1 1 1 1 1 1 1 1 1 1 2 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe02g00088 Bpe_Chr02 FPKM 53.58564 54.487259 64.424591 63.001499 52.963863 58.010395 54.527225 67.620285 64.721893 65.024826