Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00092 ATGAATAGGAGTTGTTATTCAATGGAAGAGGAACTTGAAACAAAAGAGATGGATAGTAGAAGTTTATCGTCTTCGCGCAATCAAGTACAGGACGGGACATTCATTCACAAAGTGGGGATTCCTCCAAAGCAAAACCTTTTTAAGGAGTTCAAGAACAACTTGAAAGAAACATTTTTTGCAGACGATCCTCTTCGATCTTTTAAAGATCAGTCCAAGTCTCAGAAAGTAATTCTAGGCCTTCAAGCTGTTTTTCCCATTCTTGAGTGGGGAAGAAGCTATAATCTAAGTCAGTTTAGAGGGGATCTTATTGCTGGACTCACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGATATGCTAAGCTGGCCAATTTGGCTCCTCAGTATGGGCTGTACTCAAGCTTTGTTCCACCATTGATATATGCCTTTATGGGTAGCTCAAGAGATATAGCCATTGGACCAGTGGCTGTCGTTTCTCTCTTGTTAGGCACCCTTCTTCAAAACGAGATCGATCCCGTCATGAACACACAAGAGTACTTACGACTTGCATTTACTGCTACTTTTTTCGCTGGAATCACTCAAGTCTCCCTCGGAATTTTGAGGCTAGGCTTCTTGATAGACTTTTTATCTCATGCTGCCATTGTTGGATTTATGGGTGGAGCTGCCATTACCATTGCTCTTCAGCAGCTCAAGGGATTTCTTGGAATAAGAAAATTCACAAAGAAAACAGATATAATCTCTGTTATGCATTCAGTATTCAGCTCAGCCCACCATGGATGGAACTGGCAGACTATAGTCATTGGAGCAAGCTTCCTAAGTTTTCTTTTGCTTACTAAACAAATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTTCTCCTCTGATATCTGTCATTCTATCCACCCTTTTCGTTTACCTTACTCATGCAGAAAAGAAAGGGGTTGACATTGTGAGACATATAGAGAAAGGAATCAATCCACTATCAGTTAATCAAATATTTTTTACGGGTGAATACCTCGCCAAAGGTTTCAGGATTGGCGTTGTTGCCGGAATGATAGCTCTAACGGAAGCAACTGCAATAGGAAGAACATTCGCTTCAATGAAAGACTACCAACTCGATGGGAACAAAGAAATGGTTGCACTAGGAACTATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTGGCAACAGGTTCGTTTTCACGGTCAGCTGTGAATTACATGGCGGGATGTCAAACAGCAGTTTCTAACATTGTGATGTCTATTGTTGTGTTTCTAACTTTGGAGTTTATCACCCCCCTTTTCAAATACACTCCAAATGCCATTCTTTCTGCCATTATCATCTCGGCAGTGATCAACCTAATCGACATTCAGGCTGCAATATTGATATGGAAGATCGATAAATTTGATTTCGTCGCTTGCATCGGAGCCTTCTTTGGTGTTATTTTTGCCTCTGTCGAAATAGGCCTTCTAATTGCAGTCTCTATATCCTTCGCTAAGATCCTCTTACAAGTCACAAGGCCAAGGACTGCTCTTCTCGGACAAATCCCCCAGACGGCGGTTTACAGAAATATCCAACAGTACCCAAATGCAACTAAGGTGCCTGGCGTTTTGATTGTCCGAGTTGATTCTGCAATTTACTTTTCTAACTCCAATTACACCAAAGAAAGGATACTGAGATGGTTGACAGATGAAGAAGAACAAATAAAGAAGTCTTACCTACCCAAAATCCAGTTTTTGGTAGTTGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGTTATATAGGAGCCTCCAAAAGAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGGCCGGCGGTGATAGACAAGCTTCACACATCCGATTTCGAGAGTTTGATTGGCGAGAACAACATCTTCCTCACCGTTGCAGAAGCCGTCGCAGCCTGTTCGCCGAAATTGCTTGAAGAACCATGA 1986 41.74 MNRSCYSMEEELETKEMDSRSLSSSRNQVQDGTFIHKVGIPPKQNLFKEFKNNLKETFFADDPLRSFKDQSKSQKVILGLQAVFPILEWGRSYNLSQFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLQNEIDPVMNTQEYLRLAFTATFFAGITQVSLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIRKFTKKTDIISVMHSVFSSAHHGWNWQTIVIGASFLSFLLLTKQIGKKNKKLFWVPAISPLISVILSTLFVYLTHAEKKGVDIVRHIEKGINPLSVNQIFFTGEYLAKGFRIGVVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLEFITPLFKYTPNAILSAIIISAVINLIDIQAAILIWKIDKFDFVACIGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRTALLGQIPQTAVYRNIQQYPNATKVPGVLIVRVDSAIYFSNSNYTKERILRWLTDEEEQIKKSYLPKIQFLVVEMSPVTDIDTSGIHALEELYRSLQKRDVQLVLANPGPAVIDKLHTSDFESLIGENNIFLTVAEAVAACSPKLLEEP 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 692098 695186 + Bpe007943.1 Bpe02g00092 98241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00092 661 TIGRFAM sulP: sulfate permease 85 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe02g00092 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Bpe02g00092 661 Pfam STAS domain 531 649 IPR002645 -
Bpe02g00092 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Bpe02g00092 661 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
Bpe02g00092 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Bpe02g00092 661 Gene3D STAS domain 525 656 IPR036513 -
Bpe02g00092 661 PANTHER SULFATE TRANSPORTER 1.3 16 660 - -
Bpe02g00092 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Bpe02g00092 661 PANTHER SULFATE TRANSPORTER 16 660 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00092 Bpe-Chr2:692098 Bpe10g00380 Bpe-Chr10:11379341 0 dispersed
Bpe04g01695 Bpe-Chr4:22875160 Bpe02g00092 Bpe-Chr2:692098 1.97E-131 dispersed
Bpe15g01301 Bpe-Chr15:21276463 Bpe02g00092 Bpe-Chr2:692098 3.77E-136 dispersed
Bpe02g01617 Bpe-Chr2:19029811 Bpe02g00092 Bpe-Chr2:692098 0 transposed
Bpe10g00089 Bpe-Chr10:1347308 Bpe02g00092 Bpe-Chr2:692098 0 transposed
Bpe15g00107 Bpe-Chr15:10053359 Bpe02g00092 Bpe-Chr2:692098 0 transposed
Bpe02g00092 Bpe-Chr2:692098 Bpe04g00460 Bpe-Chr4:2933503 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00092 K17470 - jre:108997232 1087.02