Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe02g00098 | ATGGCAGGTGCTATGGATTTGCACAGTTTTACTTCTTGTTTATCAGATCCCTATGGAGGCGAGCTAATGGAAGCACTTGGACCTTATATCAAAAGTGCCCCTTCTCCTCCATCTACCTCTTGTACTTCTCTTTCTCAAGACTATTTCTCTTTCTCACCTTCTCTACCACCAATGGCCATTTTCGACCAACATGGTTGCTATGGTTCGATGAACACAATGGTTTTAGACGAGTTCTCGACCCAAACTTTCCCTAATGTGGAGCAGCCATGGCCAATTGGACGAAACCACCTTACCCCATCTCAGATCCACCAGATCCAAACGCAGATCCAGCTGAATTACAGTCCAGATGTGGATTTCGAACCGACGTACCAACAGATCGACCGCAGCCATGATAAGCTAAGCTTCCTTGGTCCGAAACCCGTTCAAATGAAGCAAGTGGGTCAGCCATCAAAGCCGACGAAGCTTTACAGAGGAGTTAGGCAGAGGCACTGGGGCAAATGGGTGGCCGAGATTCGACTCCCTAAGAATCGAACTCGGCTATGGCTCGGTACCTTCGATACAGCTGAGGAAGCCGCGCTAGCTTACGACCAAGCGGCCTACAAGCTTAGAGGCGATTTTGCGAGGCTTAATTTTCCCAATTTGAAGCACCAAGATGAATTTGGGGATTATAAGCCTCTCCATTCCTCCATTGATGCGAAGCTCCAAGCAATTTGTCAAAGCATGGCTGAGTCGCAGAAACAGGGGAAAGCAGAGAAACCTCGCACCACCAAGAAAACGCAGAAGATCCAAGCTAAGCCCTTGCTGGACGAAGTTGATTCAAAAGAATCGGAGATTTGCAATCCGGTGGTAATTTTCCCGTCGCCGGTGACAACCGACAGCGACGGGTCAGCCGGCTCTTCACCTTTATCAGATCTGACGTTCCAGAATTTGACGGAGTCACCATGGGAGCAATTTTCGGAGAGTTACGCGTTGCAGAAATACCCTTCAGAGATTGATTGGGCAGGCATTTTAACTTCTTAA | 1020 | 48.33 | MAGAMDLHSFTSCLSDPYGGELMEALGPYIKSAPSPPSTSCTSLSQDYFSFSPSLPPMAIFDQHGCYGSMNTMVLDEFSTQTFPNVEQPWPIGRNHLTPSQIHQIQTQIQLNYSPDVDFEPTYQQIDRSHDKLSFLGPKPVQMKQVGQPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPNLKHQDEFGDYKPLHSSIDAKLQAICQSMAESQKQGKAEKPRTTKKTQKIQAKPLLDEVDSKESEICNPVVIFPSPVTTDSDGSAGSSPLSDLTFQNLTESPWEQFSESYALQKYPSEIDWAGILTS | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 735724 | 736743 | + | Bpe007949.1 | Bpe02g00098 | 98247 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe02g00098 | 339 | ProSiteProfiles | AP2/ERF domain profile. | 155 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | SMART | rav1_2 | 155 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | Pfam | AP2 domain | 156 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | Gene3D | AP2/ERF domain | 155 | 213 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | PRINTS | Ethylene responsive element binding protein signature | 156 | 167 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | PRINTS | Ethylene responsive element binding protein signature | 178 | 194 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe02g00098 | 339 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 | 1 | 334 | - | - | |
Bpe02g00098 | 339 | SUPERFAMILY | DNA-binding domain | 155 | 212 | IPR016177 | GO:0003677 | |
Bpe02g00098 | 339 | MobiDBLite | consensus disorder prediction | 241 | 261 | - | - | |
Bpe02g00098 | 339 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 1 | 334 | - | - | |
Bpe02g00098 | 339 | MobiDBLite | consensus disorder prediction | 247 | 261 | - | - | |
Bpe02g00098 | 339 | CDD | AP2 | 154 | 214 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g00098 | Bpe02g01114 | CCT | |
Bpe02g00098 | Bpe04g00453 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00098 | Bpe-Chr2:735724 | Bpe10g00079 | Bpe-Chr10:1135229 | 6.15E-73 | dispersed | |
Bpe05g01141 | Bpe-Chr5:23686796 | Bpe02g00098 | Bpe-Chr2:735724 | 1.03E-36 | transposed | |
Bpe02g00098 | Bpe-Chr2:735724 | Bpe02g01114 | Bpe-Chr2:14782684 | 2.96E-74 | wgd | |
Bpe02g00098 | Bpe-Chr2:735724 | Bpe04g00453 | Bpe-Chr4:2901562 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
20839 | PF00847 | AP2 | 2.30E-15 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe02g00098 | K09286 | - | qsu:112038037 | 344.739 |