Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g00098 ATGGCAGGTGCTATGGATTTGCACAGTTTTACTTCTTGTTTATCAGATCCCTATGGAGGCGAGCTAATGGAAGCACTTGGACCTTATATCAAAAGTGCCCCTTCTCCTCCATCTACCTCTTGTACTTCTCTTTCTCAAGACTATTTCTCTTTCTCACCTTCTCTACCACCAATGGCCATTTTCGACCAACATGGTTGCTATGGTTCGATGAACACAATGGTTTTAGACGAGTTCTCGACCCAAACTTTCCCTAATGTGGAGCAGCCATGGCCAATTGGACGAAACCACCTTACCCCATCTCAGATCCACCAGATCCAAACGCAGATCCAGCTGAATTACAGTCCAGATGTGGATTTCGAACCGACGTACCAACAGATCGACCGCAGCCATGATAAGCTAAGCTTCCTTGGTCCGAAACCCGTTCAAATGAAGCAAGTGGGTCAGCCATCAAAGCCGACGAAGCTTTACAGAGGAGTTAGGCAGAGGCACTGGGGCAAATGGGTGGCCGAGATTCGACTCCCTAAGAATCGAACTCGGCTATGGCTCGGTACCTTCGATACAGCTGAGGAAGCCGCGCTAGCTTACGACCAAGCGGCCTACAAGCTTAGAGGCGATTTTGCGAGGCTTAATTTTCCCAATTTGAAGCACCAAGATGAATTTGGGGATTATAAGCCTCTCCATTCCTCCATTGATGCGAAGCTCCAAGCAATTTGTCAAAGCATGGCTGAGTCGCAGAAACAGGGGAAAGCAGAGAAACCTCGCACCACCAAGAAAACGCAGAAGATCCAAGCTAAGCCCTTGCTGGACGAAGTTGATTCAAAAGAATCGGAGATTTGCAATCCGGTGGTAATTTTCCCGTCGCCGGTGACAACCGACAGCGACGGGTCAGCCGGCTCTTCACCTTTATCAGATCTGACGTTCCAGAATTTGACGGAGTCACCATGGGAGCAATTTTCGGAGAGTTACGCGTTGCAGAAATACCCTTCAGAGATTGATTGGGCAGGCATTTTAACTTCTTAA 1020 48.33 MAGAMDLHSFTSCLSDPYGGELMEALGPYIKSAPSPPSTSCTSLSQDYFSFSPSLPPMAIFDQHGCYGSMNTMVLDEFSTQTFPNVEQPWPIGRNHLTPSQIHQIQTQIQLNYSPDVDFEPTYQQIDRSHDKLSFLGPKPVQMKQVGQPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDQAAYKLRGDFARLNFPNLKHQDEFGDYKPLHSSIDAKLQAICQSMAESQKQGKAEKPRTTKKTQKIQAKPLLDEVDSKESEICNPVVIFPSPVTTDSDGSAGSSPLSDLTFQNLTESPWEQFSESYALQKYPSEIDWAGILTS 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 735724 736743 + Bpe007949.1 Bpe02g00098 98247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g00098 339 ProSiteProfiles AP2/ERF domain profile. 155 212 IPR001471 GO:0003700|GO:0006355
Bpe02g00098 339 SMART rav1_2 155 218 IPR001471 GO:0003700|GO:0006355
Bpe02g00098 339 Pfam AP2 domain 156 204 IPR001471 GO:0003700|GO:0006355
Bpe02g00098 339 Gene3D AP2/ERF domain 155 213 IPR036955 GO:0003700|GO:0006355
Bpe02g00098 339 PRINTS Ethylene responsive element binding protein signature 156 167 IPR001471 GO:0003700|GO:0006355
Bpe02g00098 339 PRINTS Ethylene responsive element binding protein signature 178 194 IPR001471 GO:0003700|GO:0006355
Bpe02g00098 339 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 334 - -
Bpe02g00098 339 SUPERFAMILY DNA-binding domain 155 212 IPR016177 GO:0003677
Bpe02g00098 339 MobiDBLite consensus disorder prediction 241 261 - -
Bpe02g00098 339 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 334 - -
Bpe02g00098 339 MobiDBLite consensus disorder prediction 247 261 - -
Bpe02g00098 339 CDD AP2 154 214 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00098 Bpe02g01114 CCT
Bpe02g00098 Bpe04g00453 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00098 Bpe-Chr2:735724 Bpe10g00079 Bpe-Chr10:1135229 6.15E-73 dispersed
Bpe05g01141 Bpe-Chr5:23686796 Bpe02g00098 Bpe-Chr2:735724 1.03E-36 transposed
Bpe02g00098 Bpe-Chr2:735724 Bpe02g01114 Bpe-Chr2:14782684 2.96E-74 wgd
Bpe02g00098 Bpe-Chr2:735724 Bpe04g00453 Bpe-Chr4:2901562 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20839 PF00847 AP2 2.30E-15 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g00098 K09286 - qsu:112038037 344.739